RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 EMG1Q92979 244 aaKnown RBP14.05□□□□□ -0.16
HMGA1-202ENST00000347617 TOLLIPQ9H0E2 274 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 LUZP4Q9P127 313 aa14.05□□□□□ -0.16
HMGA1-202ENST00000347617 KCNAB3O43448 404 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 DXOO77932 396 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 SNRNP70P08621 437 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 RPL12P30050 165 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 INSM1Q01101 510 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 EIF3IQ13347 325 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 CD226Q15762 336 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 KRBOX4Q5JUW0 171 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 RHBDD2Q6NTF9 364 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 TMPPEQ6ZT21 453 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 LHFPL1Q86WI0 220 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 OR56B1Q8NGI3 324 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 OR5D14Q8NGL3 314 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 PPP1R14AQ96A00 147 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 LOXL4Q96JB6 756 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 TGIF2Q9GZN2 237 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 C1orf123Q9NWV4 160 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 BORCS7-ASMTA0A0B4J1R7 106 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 A0A1W2PQM1 296 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 A6NLC8 198 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 K7EPK0 472 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 PPIHO43447 177 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 OIP5O43482 229 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 UTS2O95399 124 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 HOXB5P09067 269 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF883P0CG24 379 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 MYF5P13349 255 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 HOXA5P20719 270 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 FBLP22087 321 aaKnown RBP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 EMP2P54851 167 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 CCL7P80098 99 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF117Q03924 483 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ERV3-1Q14264 604 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 SLC9A3R2Q15599 337 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 GUK1Q16774 197 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 OR2B11Q5JQS5 317 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ACER2Q5QJU3 275 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 ZNF529Q6P280 563 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 FAM71E2Q8N5Q1 922 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 PLPP5Q8NEB5 264 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 KCNG3Q8TAE7 436 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 SECTM1Q8WVN6 248 aa14.04□□□□□ -0.16
HMGA1-202ENST00000347617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGA1-202ENST00000347617 TMEM269A0A1B0GVZ9 245 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 A0A1W2PPE3 182 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 A0A1W2PPH5 198 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 C9JQL5 133 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 M0R036 132 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 ADAP1O75689 374 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 NQO2P16083 231 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 HIST1H1DP16402 221 aaKnown RBP14.03□□□□□ -0.16
HMGA1-202ENST00000347617 GNB3P16520 340 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 ARL6IP1Q15041 203 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 ANKRD55Q3KP44 614 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 RTL6Q6ICC9 239 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.03□□□□□ -0.16
HMGA1-202ENST00000347617 PNLDC1Q8NA58 520 aaKnown RBP14.03□□□□□ -0.16
HMGA1-202ENST00000347617 CMBLQ96DG6 245 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 OR10C1Q96KK4 312 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 SLC46A1Q96NT5 459 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 UNKLQ9H9P5 680 aaKnown RBP14.03□□□□□ -0.16
HMGA1-202ENST00000347617 TUBD1Q9UJT1 453 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
HMGA1-202ENST00000347617 SDK1Q7Z5N4 2213 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 IGLV3-12A0A075B6K2 115 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 HRKO00198 91 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 OR8U9P0C7N5 309 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 GP1BBP13224 206 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 CTLA4P16410 223 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 PGCP20142 388 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 OR1D4P47884 311 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 SULT1A1P50225 295 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 CLDN6P56747 220 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 S100A10P60903 97 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 SUPT4H1P63272 117 aaKnown RBP14.02□□□□□ -0.16
HMGA1-202ENST00000347617 TRA2AQ13595 282 aaKnown RBP eCLIP14.02□□□□□ -0.16
HMGA1-202ENST00000347617 TRIM61Q5EBN2 209 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 GATSQ8NAP1 163 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 OR8U1Q8NH10 309 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 PTPMT1Q8WUK0 201 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-202ENST00000347617 FGGYQ96C11 551 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 RTBDNQ9BSG5 229 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-202ENST00000347617 GGACTQ9BVM4 153 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 MOB1AQ9H8S9 216 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 SPACA1Q9HBV2 294 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.16
HMGA1-202ENST00000347617 OSGIN2Q9Y236 505 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 B3GALT5Q9Y2C3 310 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 TMED3Q9Y3Q3 217 aa14.02□□□□□ -0.16
HMGA1-202ENST00000347617 IGHV5-10-1A0A0J9YXX1 117 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 A0A1W2PQD3 144 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 NPIPB13A6NJU9 1138 aa14.01□□□□□ -0.17
HMGA1-202ENST00000347617 NPIPB4C9JG80 1138 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms