RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PIGTQ969N2 578 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 PLK3Q9H4B4 646 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 MSL2Q9HCI7 577 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 FOXJ3Q9UPW0 622 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 TRAV1-2A0A0B4J238 106 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 ZSCAN5BA6NJL1 495 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 ANKRD30BLA7E2S9 258 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 NCR1O76036 304 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 NRASP01111 189 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 MAS1P04201 325 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 COX6B1P14854 86 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 SERPINF1P36955 418 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 ALDH3B1P43353 468 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 CAV3P56539 151 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 OR10A3P58181 314 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 MXD1Q05195 221 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 ZNF295-AS1Q8N0V1 137 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 OR5D14Q8NGL3 314 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 HPSE2Q8WWQ2 592 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 PP6455Q8WZ26 134 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 BCL7BQ9BQE9 202 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 TCF7L1Q9HCS4 588 aa16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 MRPL15Q9P015 296 aaKnown RBP16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 AK6Q9Y3D8 172 aaKnown RBP16.2■□□□□ 0.18
CHMP4A-201ENST00000347519 A0A0G2JK05 382 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 A0A1W2PPW3 197 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 CTAG2O75638 210 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 MYL9P24844 172 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 RPS19P39019 145 aaKnown RBP16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 MTNR1BP49286 362 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 PLCXD3Q63HM9 321 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 CRIP3Q6Q6R5 217 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 TRMT10AQ8TBZ6 339 aaKnown RBP16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 ITFG2Q969R8 447 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 SPACA5Q96QH8 159 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 DCSTAMPQ9H295 470 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 SNTG1Q9NSN8 517 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 TMEM100Q9NV29 134 aa16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 USP9YO00507 2555 aaPredicted RBP16.19■□□□□ 0.18
CHMP4A-201ENST00000347519 A0A1B0GWJ7 208 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 HS3ST1O14792 307 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 SULT1B1O43704 296 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 NOL3O60936 208 aaKnown RBP16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 RAB3AP20336 220 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 EFNB3Q15768 340 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 HIST2H2BCQ6DN03 193 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 ZDHHC23Q8IYP9 409 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 OR52N4Q8NGI2 321 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 ITPKCQ96DU7 683 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 FAM192AQ9GZU8 254 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 MPC1Q9Y5U8 109 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 ARFGEF3Q5TH69 2177 aa16.18■□□□□ 0.18
CHMP4A-201ENST00000347519 IGKV1-27A0A075B6S5 117 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 TRIM64BA6NI03 449 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 ZNF701M0R085 212 aaPredicted RBP16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 SLC22A1O15245 554 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 NAT2P11245 290 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 PRF1P14222 555 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 AZGP1P25311 298 aaKnown RBP16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 BDKRB2P30411 391 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 THBS2P35442 1172 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 EVX1P49640 407 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 PPP3R1P63098 170 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 SWI5Q1ZZU3 235 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 SPRNQ5BIV9 151 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 LYPD6Q86Y78 171 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 OR10AD1Q8NGE0 317 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 OR5P3Q8WZ94 311 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 FBXW5Q969U6 566 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 ADAT1Q9BUB4 502 aaKnown RBP16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 UBTD1Q9HAC8 227 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 CKLFQ9UBR5 152 aa16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 CGGBP1Q9UFW8 167 aaPredicted RBP16.17■□□□□ 0.18
CHMP4A-201ENST00000347519 VSTM5A8MXK1 200 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 ALX3O95076 343 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 GOSR1O95249 250 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 CD8AP01732 235 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 SELENOVP59797 346 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 OR8G1Q15617 311 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 NKPD1Q17RQ9 610 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 USP43Q70EL4 1123 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 WDR86Q86TI4 376 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 ZCCHC24Q8N2G6 241 aaKnown RBP16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 MUC15Q8N387 334 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 FTMTQ8N4E7 242 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 OR13G1Q8NGZ3 307 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 RFT1Q96AA3 541 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 BARHL1Q9BZE3 327 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 SLITRK2Q9H156 845 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 TPK1Q9H3S4 243 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 TMEM138Q9NPI0 162 aa16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 PLEKHB1Q9UF11 243 aaPredicted RBP16.16■□□□□ 0.18
CHMP4A-201ENST00000347519 IGHV3-64DA0A0J9YX35 117 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 FAM230AA0A1W2PPH8 454 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 B9A039 149 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 F5H5P2 479 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 SPRY3O43610 288 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 IL1AP01583 271 aa16.15■□□□□ 0.18
CHMP4A-201ENST00000347519 SOD3P08294 240 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms