RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 AGFG2O95081 481 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 FAM122CQ6P4D5 195 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 HIST2H3AQ71DI3 136 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 LYG1Q8N1E2 194 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 CLEC18CQ8NCF0 446 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 M1APQ8TC57 530 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 LRRC29Q8WV35 223 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 TCRBV5S2A0A599 114 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 SLC31A2O15432 143 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 RBP4P02753 201 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 PSMB6P28072 239 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 GALNSP34059 522 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 UBALD1Q8TB05 177 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 AKR1E2Q96JD6 320 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 URGCP-MRPS24S4R325 110 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 ITGB4P16144 1822 aa13.43□□□□□ -0.26
UBE3B-202ENST00000342494 C21orf140B9A014 251 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 HNF1AP20823 631 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 RPL12P30050 165 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 PNLIPRP3Q17RR3 467 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 UBE3DQ7Z6J8 389 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 TMEM123Q8N131 208 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 CLDN23Q96B33 292 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 GAL3ST2Q9H3Q3 398 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 FGF20Q9NP95 211 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 FOXJ3Q9UPW0 622 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 NUFIP2Q7Z417 695 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 MCHR2Q969V1 340 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 DUS3LQ96G46 650 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 SBK3P0C264 359 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 PPP1CBP62140 327 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 SMRP1Q8NCR6 262 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 OR4S1Q8NGB4 309 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 SCARB1Q8WTV0 552 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 PLEKHA2Q9HB19 425 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 EXOSC2Q13868 293 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 HAGHQ16775 308 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 ZFP62Q8NB50 900 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 ALG14Q96F25 216 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 DOK1Q99704 481 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 V9GYS6 101 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 H7BYZ3 331 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 GPR31O00270 319 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 OR2F2O95006 317 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 FBP1P09467 338 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 OR2F1Q13607 317 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 WDR74Q6RFH5 385 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 ZNRF4Q8WWF5 429 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 UBTD1Q9HAC8 227 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 GLRX2Q9NS18 164 aa13.42□□□□□ -0.26
UBE3B-202ENST00000342494 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
UBE3B-202ENST00000342494 EPPINO95925 133 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 HRASP01112 189 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 CEACAM3P40198 252 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 PRRX1P54821 245 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF90Q03938 601 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 AMER3Q8N944 861 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 RFESDQ8TAC1 157 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 TAF1P21675 1872 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 SFTPCP11686 197 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 AKR1C3P42330 323 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 GP2P55259 537 aaKnown RBP13.41□□□□□ -0.26
UBE3B-202ENST00000342494 PLAC9Q5JTB6 97 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 SFTPA1Q8IWL2 248 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 FAM60AQ9NP50 221 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 hADV38S2A0JD32 116 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 CD82P27701 267 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 PDCD1Q15116 288 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 MOB1BQ7L9L4 216 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 CMBLQ96DG6 245 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 C20orf24Q9BUV8 137 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 AMMECR1Q9Y4X0 333 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-202ENST00000342494 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 DEFB108AA8MXU0 73 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 SLC25A1P53007 311 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 UCNP55089 124 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
UBE3B-202ENST00000342494 BHLHA15Q7RTS1 189 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-202ENST00000342494 RIMKLAQ8IXN7 391 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
UBE3B-202ENST00000342494 MEX3AA1L020 520 aaKnown RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 DBX1A6NMT0 343 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ADAM20O43506 726 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 KRASP01116 189 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 OR5D13Q8NGL4 314 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms