RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 BPNT1O95861 308 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 PJVKQ0ZLH3 352 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 LTC4SQ16873 150 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 TMEM164Q5U3C3 297 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 VASH2Q86V25 355 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC38A9Q8NBW4 561 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC26A10Q8NG04 563 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 FRZBQ92765 325 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CPNE4Q96A23 557 aaPredicted RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 CCNL2Q96S94 520 aaPredicted RBP11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 KCNK7Q9Y2U2 307 aa11.07□□□□□ -0.64
SNRNP48-201ENST00000342415 HIST1H1DP16402 221 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RCC1P18754 421 aaPredicted RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 CD27P26842 260 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 GDF1P27539 372 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 CNN3Q15417 329 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 LIPHQ8WWY8 451 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 TGIF2Q9GZN2 237 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 UNKLQ9H9P5 680 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 C12orf10Q9HB07 376 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 NPDC1Q9NQX5 325 aaPredicted RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 SCN8AQ9UQD0 1980 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 IGKV1D-42A0A075B6H8 117 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 NSG1A0A0A6YYJ2 146 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RAB19A4D1S5 217 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MFSD2BA6NFX1 497 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 ALG1L2C9J202 215 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MSX1P28360 303 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MPPED2Q15777 294 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RPUSD3Q6P087 351 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 EMG1Q92979 244 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 UQCC1Q9NVA1 299 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 NDRG3Q9UGV2 375 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MPDZO75970 2070 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 A0A096LPE4 126 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 A0A1W2PPZ6 126 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 ABCD4O14678 606 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 EFSO43281 561 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RAB13P51153 203 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RAB11AP62491 216 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 FUT7Q11130 342 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MICBQ29980 383 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 FHL5Q5TD97 284 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 LCN15Q6UWW0 184 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 HIST2H3AQ71DI3 136 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MISPQ8IVT2 679 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 KIRREL1Q96J84 757 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 OR5H15A6NDH6 313 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 HS3ST1O14792 307 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 SSSCA1O60232 199 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 OR2C1O95371 312 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 GP1BAP07359 652 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 B4GALT1P15291 398 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RPL23AP62750 156 aaKnown RBP11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC35A1P78382 337 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 MKXQ8IYA7 352 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 OR2I1PQ8NGU4 316 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RXFP4Q8TDU9 374 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RDH5Q92781 318 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 RASL12Q9NYN1 266 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 OR14J1Q9UGF5 321 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 CYB5R1Q9UHQ9 305 aa11.06□□□□□ -0.64
SNRNP48-201ENST00000342415 DOCK7Q96N67 2140 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 CD300LBA8K4G0 201 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 LAMTOR5O43504 91 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 CRYBA1P05813 215 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 SPP1P10451 314 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 MSR1P21757 451 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 ID4P47928 161 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 NINJ1Q92982 152 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 FBXL17Q9UF56 701 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 ONECUT2O95948 504 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 FAM157BP0CG42 384 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 HOXC12P31275 282 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 PLXDC2Q6UX71 529 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 LGI3Q8N145 548 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 MRPS24Q96EL2 167 aaKnown RBP11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 HLA-HP01893 362 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 ASAH2BP0C7U1 165 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 PNLIPP16233 465 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 NKX2-1P43699 371 aaPredicted RBP11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 F2RL1P55085 397 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 FABP9Q0Z7S8 132 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 SLC22A18ASQ8N1D0 253 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 OR5B12Q96R08 314 aa11.05□□□□□ -0.64
SNRNP48-201ENST00000342415 HDHD3Q9BSH5 251 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms