RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IMMP1LQ96LU5 166 aa12.79□□□□□ -0.36
TDP2-201ENST00000341060 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
TDP2-201ENST00000341060 CHST5Q9GZS9 411 aa12.79□□□□□ -0.36
TDP2-201ENST00000341060 MS4A7Q9GZW8 240 aaPredicted RBP12.79□□□□□ -0.36
TDP2-201ENST00000341060 NCKAP5O14513 1909 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 F5H0A9 414 aaPredicted RBP12.78□□□□□ -0.36
TDP2-201ENST00000341060 F5H5K5 113 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 WDPCPO95876 746 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 UMODP07911 640 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 COX6A1P12074 109 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 EXT1Q16394 746 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 PMS2CLQ68D20 193 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 Q6ZSR3 168 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 C1QL2Q7Z5L3 287 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 ARMC10Q8N2F6 343 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 OR51T1Q8NGJ9 327 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 OR5D18Q8NGL1 313 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
TDP2-201ENST00000341060 GNRHR2Q96P88 292 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 ZNF700Q9H0M5 742 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 PROK2Q9HC23 129 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 PILRBQ9UKJ0 227 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 CSAG2Q9Y5P2 127 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 SDK2Q58EX2 2172 aa12.78□□□□□ -0.36
TDP2-201ENST00000341060 A0A0B4J2A0 478 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 NPIPA2E9PIF3 369 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 NPIPA3F8WFD2 350 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 STMND1H3BQB6 276 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 TSPAN4O14817 238 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 LAMTOR5O43504 91 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 SFT2D2O95562 160 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 GP1BAP07359 652 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 AMY2BP19961 511 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 PRKACBP22694 351 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 TAS2R46P59540 309 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 PPIAP62937 165 aaKnown RBP12.77□□□□□ -0.36
TDP2-201ENST00000341060 DMRTC1Q5HYR2 192 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 RAET1LQ5VY80 246 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 CLEC18BQ6UXF7 455 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 TMEM17Q86X19 198 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 PAQR8Q8TEZ7 354 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 CDC6Q99741 560 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 RAB18Q9NP72 206 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 TAS2R3Q9NYW6 316 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 FOXD3Q9UJU5 478 aaPredicted RBP12.77□□□□□ -0.36
TDP2-201ENST00000341060 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.36
TDP2-201ENST00000341060 IGHV3-15A0A0B4J1V0 119 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 OR5H15A6NDH6 313 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 ZIC3O60481 467 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 PGAM2P15259 253 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 FAHP16930 419 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 CSNK2A1P68400 391 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 UBE2V2Q15819 145 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 RSPO1Q2MKA7 263 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 AADACL3Q5VUY0 350 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 NPRL2Q8WTW4 380 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 HAS2Q92819 552 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 C10orf35Q96D05 121 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 UCN2Q96RP3 112 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 RTBDNQ9BSG5 229 aaPredicted RBP12.77□□□□□ -0.37
TDP2-201ENST00000341060 IER2Q9BTL4 223 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 TM2D1Q9BX74 207 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.37
TDP2-201ENST00000341060 CNTRLQ7Z7A1 2325 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 SERPINE3A8MV23 424 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 F8VVB4 439 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 F8VWA3 439 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 DHHO43323 396 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 APOC1P02654 83 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 SERPINA2P20848 420 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 OR3A2P47893 321 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 SSR4P51571 173 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 DTX1Q86Y01 620 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 OR13G1Q8NGZ3 307 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 M1APQ8TC57 530 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 DCUN1D4Q92564 292 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 NAA11Q9BSU3 229 aaPredicted RBP12.76□□□□□ -0.37
TDP2-201ENST00000341060 ST6GALNAC5Q9BVH7 336 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 PECRQ9BY49 303 aa12.76□□□□□ -0.37
TDP2-201ENST00000341060 DKKL1Q9UK85 242 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms