RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
RET-201ENST00000340058 MEIKINA0A087WXM9 373 aa13.05□□□□□ -0.32
RET-201ENST00000340058 CLDN1O95832 211 aa13.05□□□□□ -0.32
RET-201ENST00000340058 EXOSC2Q13868 293 aaKnown RBP13.05□□□□□ -0.32
RET-201ENST00000340058 OR8B8Q15620 311 aa13.05□□□□□ -0.32
RET-201ENST00000340058 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
RET-201ENST00000340058 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
RET-201ENST00000340058 CDC20BQ86Y33 519 aa13.05□□□□□ -0.32
RET-201ENST00000340058 MUC20Q8N307 709 aaPredicted RBP13.05□□□□□ -0.32
RET-201ENST00000340058 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
RET-201ENST00000340058 ASB10Q8WXI3 467 aa13.05□□□□□ -0.32
RET-201ENST00000340058 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
RET-201ENST00000340058 NECAP2Q9NVZ3 263 aa13.05□□□□□ -0.32
RET-201ENST00000340058 TCF20Q9UGU0 1960 aaKnown RBP13.04□□□□□ -0.32
RET-201ENST00000340058 RPL35P42766 123 aaKnown RBP13.04□□□□□ -0.32
RET-201ENST00000340058 GALNT16Q8N428 558 aa13.04□□□□□ -0.32
RET-201ENST00000340058 KCNE4Q8WWG9 221 aa13.04□□□□□ -0.32
RET-201ENST00000340058 MTFP1Q9UDX5 166 aa13.04□□□□□ -0.32
RET-201ENST00000340058 NOTCH4Q99466 2003 aa13.04□□□□□ -0.32
RET-201ENST00000340058 A0A0D9SG52 128 aa13.04□□□□□ -0.32
RET-201ENST00000340058 LGALS8O00214 317 aa13.04□□□□□ -0.32
RET-201ENST00000340058 LMX1BO60663 402 aa13.04□□□□□ -0.32
RET-201ENST00000340058 PNPP00491 289 aa13.04□□□□□ -0.32
RET-201ENST00000340058 IFNA2P01563 188 aa13.04□□□□□ -0.32
RET-201ENST00000340058 PDGFAP04085 211 aa13.04□□□□□ -0.32
RET-201ENST00000340058 TRAPPC2P0DI81 140 aa13.04□□□□□ -0.32
RET-201ENST00000340058 TRAPPC2BP0DI82 140 aa13.04□□□□□ -0.32
RET-201ENST00000340058 ERVK-16P61578 105 aa13.04□□□□□ -0.32
RET-201ENST00000340058 TRA2AQ13595 282 aaKnown RBP eCLIP13.04□□□□□ -0.32
RET-201ENST00000340058 RFPL4BQ6ZWI9 263 aa13.04□□□□□ -0.32
RET-201ENST00000340058 DMBX1Q8NFW5 382 aa13.04□□□□□ -0.32
RET-201ENST00000340058 H1FXQ92522 213 aaKnown RBP13.04□□□□□ -0.32
RET-201ENST00000340058 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
RET-201ENST00000340058 TP53TG5Q9Y2B4 290 aa13.04□□□□□ -0.32
RET-201ENST00000340058 A0A1W2PP11 408 aa13.04□□□□□ -0.32
RET-201ENST00000340058 SHISA3A0PJX4 238 aa13.04□□□□□ -0.32
RET-201ENST00000340058 SOCS1O15524 211 aa13.04□□□□□ -0.32
RET-201ENST00000340058 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
RET-201ENST00000340058 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
RET-201ENST00000340058 GIPP09681 153 aaPredicted RBP13.04□□□□□ -0.32
RET-201ENST00000340058 RRASP10301 218 aa13.04□□□□□ -0.32
RET-201ENST00000340058 ASCL1P50553 236 aa13.04□□□□□ -0.32
RET-201ENST00000340058 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
RET-201ENST00000340058 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
RET-201ENST00000340058 RFESDQ8TAC1 157 aa13.04□□□□□ -0.32
RET-201ENST00000340058 UBL7Q96S82 380 aaPredicted RBP13.04□□□□□ -0.32
RET-201ENST00000340058 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
RET-201ENST00000340058 NMNAT2Q9BZQ4 307 aa13.04□□□□□ -0.32
RET-201ENST00000340058 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
RET-201ENST00000340058 FREM3P0C091 2139 aa13.04□□□□□ -0.32
RET-201ENST00000340058 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
RET-201ENST00000340058 A0A0J9YW62 118 aa13.03□□□□□ -0.32
RET-201ENST00000340058 INHBBP09529 407 aa13.03□□□□□ -0.32
RET-201ENST00000340058 PTGFRP43088 359 aa13.03□□□□□ -0.32
RET-201ENST00000340058 MRPS34P82930 218 aaKnown RBP13.03□□□□□ -0.32
RET-201ENST00000340058 ZNF766Q5HY98 468 aa13.03□□□□□ -0.32
RET-201ENST00000340058 SLC25A30Q5SVS4 291 aa13.03□□□□□ -0.32
RET-201ENST00000340058 OR8G2PQ6IF36 304 aa13.03□□□□□ -0.32
RET-201ENST00000340058 WFDC8Q8IUA0 241 aa13.03□□□□□ -0.32
RET-201ENST00000340058 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
RET-201ENST00000340058 GCM1Q9NP62 436 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ST6GALNAC2Q9UJ37 374 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
RET-201ENST00000340058 A0A1B0GUH1 482 aa13.03□□□□□ -0.32
RET-201ENST00000340058 MSTNO14793 375 aa13.03□□□□□ -0.32
RET-201ENST00000340058 IL2RAP01589 272 aa13.03□□□□□ -0.32
RET-201ENST00000340058 CA6P23280 308 aa13.03□□□□□ -0.32
RET-201ENST00000340058 S100A2P29034 98 aa13.03□□□□□ -0.32
RET-201ENST00000340058 RPS16P62249 146 aaKnown RBP13.03□□□□□ -0.32
RET-201ENST00000340058 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
RET-201ENST00000340058 SSPNQ14714 243 aa13.03□□□□□ -0.32
RET-201ENST00000340058 RNLSQ5VYX0 342 aa13.03□□□□□ -0.32
RET-201ENST00000340058 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ZNF529Q6P280 563 aa13.03□□□□□ -0.32
RET-201ENST00000340058 OR2M3Q8NG83 312 aa13.03□□□□□ -0.32
RET-201ENST00000340058 OR1J1Q8NGS3 322 aa13.03□□□□□ -0.32
RET-201ENST00000340058 FBLIM1Q8WUP2 373 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ASB5Q8WWX0 329 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ST6GAL2Q96JF0 529 aa13.03□□□□□ -0.32
RET-201ENST00000340058 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
RET-201ENST00000340058 IFNA4P05014 189 aa13.03□□□□□ -0.32
RET-201ENST00000340058 GLRA1P23415 457 aa13.03□□□□□ -0.32
RET-201ENST00000340058 PIGPP57054 158 aa13.03□□□□□ -0.32
RET-201ENST00000340058 TSC22D1Q15714 1073 aa13.03□□□□□ -0.32
RET-201ENST00000340058 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
RET-201ENST00000340058 EXD3Q8N9H8 876 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ZNRF4Q8WWF5 429 aa13.03□□□□□ -0.32
RET-201ENST00000340058 TIMM8BQ9Y5J9 83 aaPredicted RBP13.03□□□□□ -0.32
RET-201ENST00000340058 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
RET-201ENST00000340058 CACNA1AO00555 2505 aa13.03□□□□□ -0.32
RET-201ENST00000340058 IGKV1D-42A0A075B6H8 117 aa13.03□□□□□ -0.32
RET-201ENST00000340058 TNFSF4P23510 183 aa13.03□□□□□ -0.32
RET-201ENST00000340058 ZNF133P52736 654 aaPredicted RBP13.03□□□□□ -0.32
RET-201ENST00000340058 TMEM200AQ86VY9 491 aa13.03□□□□□ -0.32
RET-201ENST00000340058 WDR5BQ86VZ2 330 aa13.03□□□□□ -0.32
RET-201ENST00000340058 RTN4IP1Q8WWV3 396 aaPredicted RBP13.03□□□□□ -0.32
RET-201ENST00000340058 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
RET-201ENST00000340058 MARVELD1Q9BSK0 173 aa13.03□□□□□ -0.32
RET-201ENST00000340058 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.32
RET-201ENST00000340058 TSPAN2O60636 221 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms