RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OR2V2Q96R30 315 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 MICU1Q9BPX6 476 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMED9Q9BVK6 235 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 SAP30LQ9HAJ7 183 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 ABCB9Q9NP78 766 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 IL19Q9UHD0 177 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 CSMD2Q7Z408 3487 aa11.95□□□□□ -0.5
APOBEC3B-202ENST00000335760 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 IGHV3-64DA0A0J9YX35 117 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 SSX4O60224 188 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 SERPINA3P01011 423 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 OCM2P0CE71 109 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 CD200P41217 278 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 TESK1Q15569 626 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 DMRTC1Q5HYR2 192 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 CEP78Q5JTW2 689 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMEM42Q69YG0 159 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 PHC2Q8IXK0 858 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 LRRC75A-AS1Q8N1F1 130 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 UBASH3BQ8TF42 649 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR5P3Q8WZ94 311 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 ITPKCQ96DU7 683 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 VCX3AQ9NNX9 186 aa11.94□□□□□ -0.5
APOBEC3B-202ENST00000335760 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 GRPP07492 148 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 DAOP14920 347 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 RPS25P62851 125 aaKnown RBP11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 MAB21L1Q13394 359 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 Q499Y3 187 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 HPSE2Q8WWQ2 592 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMEM203Q969S6 136 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 RNF170Q96K19 258 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR14A2Q96R54 314 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 RTL8AQ9BWD3 113 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 CHST5Q9GZS9 411 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 C14orf119Q9NWQ9 140 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 TREM2Q9NZC2 230 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 USF3Q68DE3 2245 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 POLQO75417 2590 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 ITPR2Q14571 2701 aa11.93□□□□□ -0.5
APOBEC3B-202ENST00000335760 IGHV1-69-2A0A0G2JMI3 117 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 LOC100289279A0A1B0GTE1 492 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CDC14BO60729 498 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CD2P06729 351 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SMIM18P0DKX4 95 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 COL8A2P25067 703 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 THBS2P35442 1172 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SSX1Q16384 188 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CARTPTQ16568 116 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ACSM3Q53FZ2 586 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SYT6Q5T7P8 510 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SERPINA12Q8IW75 414 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 PARP16Q8N5Y8 322 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CELF2-AS1Q8N7Q2 184 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 NPRL2Q8WTW4 380 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 RDH5Q92781 318 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 MUL1Q969V5 352 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TMEM106AQ96A25 262 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 FGF23Q9GZV9 251 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZCCHC4Q9H5U6 513 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 SF3B6Q9Y3B4 125 aaKnown RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ANKRD17O75179 2603 aaKnown RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 PDZD2O15018 2839 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TRIM64CA6NLI5 447 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CYSRT1A8MQ03 144 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZNF879B4DU55 563 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZNF732B4DXR9 585 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CCRL2O00421 344 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 OCMP0CE72 109 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ATF1P18846 271 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 GABRA5P31644 462 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 CRYBB2P43320 205 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 GPM6AP51674 278 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 GP2P55259 537 aaKnown RBP11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 INSL4Q14641 139 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 TRAM1Q15629 374 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 UTS2BQ765I0 119 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 ZNF525Q8N782 197 aa11.92□□□□□ -0.5
APOBEC3B-202ENST00000335760 OR5D14Q8NGL3 314 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms