RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GHRLQ9UBU3 117 aa20.53■□□□□ 0.88
NDEL1-201ENST00000334527 FLVCR1Q9Y5Y0 555 aa20.53■□□□□ 0.88
NDEL1-201ENST00000334527 V9GYS6 101 aa20.53■□□□□ 0.88
NDEL1-201ENST00000334527 SDCBPO00560 298 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 EIF1BO60739 113 aaKnown RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 HTR3BO95264 441 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 COX6A1P12074 109 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 BLVRBP30043 206 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 SNU13P55769 128 aaKnown RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 CSNK2A1P68400 391 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 CYCSP99999 105 aaKnown RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 EIF3IQ13347 325 aaKnown RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 TMEM17Q86X19 198 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 CSNK2A3Q8NEV1 391 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 OR9K2Q8NGE7 335 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 MAFIPQ8WZ33 124 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 ROBO4Q8WZ75 1007 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 IMMP1LQ96LU5 166 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 PROK2Q9HC23 129 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 DKKL1Q9UK85 242 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 ADAP1O75689 374 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 CD63P08962 238 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 NAT2P11245 290 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 FCGR2AP12318 317 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 DSCR4P56555 118 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 RSPO1Q2MKA7 263 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 PEG10Q86TG7 708 aaKnown RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 TMEM123Q8N131 208 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 SCGB3A2Q96PL1 93 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 RTBDNQ9BSG5 229 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-201ENST00000334527 ZNF700Q9H0M5 742 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 PIGLQ9Y2B2 252 aa20.52■□□□□ 0.88
NDEL1-201ENST00000334527 FOXI3A8MTJ6 420 aaPredicted RBP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 SIGLEC5O15389 551 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 DHHO43323 396 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 ZIC3O60481 467 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 HPNP05981 417 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 KLK3P07288 261 aaPredicted RBP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 GP1BAP07359 652 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 ALDH3B1P43353 468 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 SIGLEC14Q08ET2 396 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 EXT1Q16394 746 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 FOXL2NBQ6ZUU3 175 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 OR5AP2Q8NGF4 316 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 NAA11Q9BSU3 229 aaPredicted RBP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 RNF126Q9BV68 326 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 PILRBQ9UKJ0 227 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 VAMP5O95183 116 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 SSR4P51571 173 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 SUPT4H1P63272 117 aaKnown RBP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 AADACL3Q5VUY0 350 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 LHFPL1Q86WI0 220 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 PP6455Q8WZ26 134 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 PIK3IP1Q96FE7 263 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 S100A13Q99584 98 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 CDC6Q99741 560 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 PECRQ9BY49 303 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 ELL3Q9HB65 397 aaPredicted RBP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 RAB18Q9NP72 206 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.51■□□□□ 0.87
NDEL1-201ENST00000334527 EHFQ9NZC4 300 aa20.51■□□□□ 0.87
NDEL1-201ENST00000334527 TRBV6-7A0A0A0MS04 114 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 NUPL2O15504 423 aaKnown RBP20.5■□□□□ 0.87
NDEL1-201ENST00000334527 DBHP09172 617 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF133P52736 654 aaPredicted RBP20.5■□□□□ 0.87
NDEL1-201ENST00000334527 TAS2R46P59540 309 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF273Q14593 569 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 RSPO4Q2I0M5 234 aaPredicted RBP20.5■□□□□ 0.87
NDEL1-201ENST00000334527 ATRAIDQ6UW56 229 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 BOLLQ8N9W6 283 aaKnown RBP20.5■□□□□ 0.87
NDEL1-201ENST00000334527 BPIFCQ8NFQ6 507 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 PIGTQ969N2 578 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 CHST5Q9GZS9 411 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 HS3ST3B1Q9Y662 390 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 TEX13DA0A0J9YY54 714 aaPredicted RBP20.5■□□□□ 0.87
NDEL1-201ENST00000334527 M0R135 149 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 HIST1H3AP68431 136 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 ANKRD55Q3KP44 614 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 HIST2H3PS2Q5TEC6 136 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 PMS2CLQ68D20 193 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 HIST2H3AQ71DI3 136 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF799Q96GE5 643 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 PLEK2Q9NYT0 353 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 OSGIN2Q9Y236 505 aa20.5■□□□□ 0.87
NDEL1-201ENST00000334527 MPTX1A8MV57 137 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 H0YIZ8 118 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 KLF7O75840 302 aaPredicted RBP20.49■□□□□ 0.87
NDEL1-201ENST00000334527 TMEM156Q8N614 296 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 PAQR8Q8TEZ7 354 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 RRNAD1Q96FB5 475 aaKnown RBP20.49■□□□□ 0.87
NDEL1-201ENST00000334527 ULBP2Q9BZM5 246 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 FAM117AQ9C073 453 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 A0A0B4J2A0 478 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 TNFSF11O14788 317 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 CFIP05156 583 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 GLRA1P23415 457 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 OTX1P32242 354 aaPredicted RBP20.49■□□□□ 0.87
NDEL1-201ENST00000334527 Q7L0L9 218 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 ZSCAN4Q8NAM6 433 aaPredicted RBP20.49■□□□□ 0.87
NDEL1-201ENST00000334527 STOML3Q8TAV4 291 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms