RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CMBLQ96DG6 245 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
C9orf47-201ENST00000334490 PRSS12P56730 875 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 PDCD1Q15116 288 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 POU4F3Q15319 338 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 AADACL4Q5VUY2 407 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 BRICD5Q6PL45 260 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
C9orf47-201ENST00000334490 ICAM5Q9UMF0 924 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 MIA3Q5JRA6 1907 aa13.35□□□□□ -0.27
C9orf47-201ENST00000334490 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 FABP7O15540 132 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 PPIHO43447 177 aaKnown RBP13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CD3DP04234 171 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 Q8IYB0 196 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 EXTL1Q92935 676 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 PLEKHB1Q9UF11 243 aaPredicted RBP13.34□□□□□ -0.27
C9orf47-201ENST00000334490 IGHV1-45A0A0A0MS14 117 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 A0A0U1RQK1 487 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CENPVL1A0A0U1RR11 272 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CCSO14618 274 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 RAB6AP20340 208 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 HRH1P35367 487 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 GNB1P62873 340 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 FXNQ16595 210 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 MESTQ5EB52 335 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 ADPRHL1Q8NDY3 354 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 HRH4Q9H3N8 390 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 RPS16P62249 146 aaKnown RBP13.34□□□□□ -0.27
C9orf47-201ENST00000334490 TNFAIP6P98066 277 aaPredicted RBP13.34□□□□□ -0.27
C9orf47-201ENST00000334490 RTL8BQ17RB0 113 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 SUCNR1Q9BXA5 334 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CACNA1HO95180 2353 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CCL21O00585 134 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 CTSBP07858 339 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 NKX2-1P43699 371 aaPredicted RBP13.34□□□□□ -0.27
C9orf47-201ENST00000334490 ZNF674Q2M3X9 581 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 SERTAD4Q9NUC0 356 aa13.34□□□□□ -0.27
C9orf47-201ENST00000334490 IGKV1D-16P01601 117 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 AADACP22760 399 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 HSD17B11Q8NBQ5 300 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 GALMQ96C23 342 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 PLPPR2Q96GM1 343 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 IL17BQ9UHF5 180 aa13.33□□□□□ -0.27
C9orf47-201ENST00000334490 SERPINE3A8MV23 424 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 PMP22Q01453 160 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 CST9LP1Q5W188 147 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 SLA2Q9H6Q3 261 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 TAAR3PQ9P1P4 343 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 ST8SIA3O43173 380 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 PLPP2O43688 288 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 AGFG2O95081 481 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 RFX2P48378 723 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
C9orf47-201ENST00000334490 UBALD1Q8TB05 177 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 BORCS7Q96B45 105 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 MPGP29372 298 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF626Q68DY1 528 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.28
C9orf47-201ENST00000334490 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 MEX3AA1L020 520 aaKnown RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 RAB13P51153 203 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 SUB1P53999 127 aaKnown RBP eCLIP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 ZDHHC16Q969W1 377 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 FADS1O60427 444 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 OR8U8P0C7N1 319 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 MAGEB1P43366 347 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 LSM6P62312 80 aaKnown RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 BAMBIQ13145 260 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 CDC20BQ86Y33 519 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 TMEM105Q8N8V8 129 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 MYOZ1Q9NP98 299 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 DLL4Q9NR61 685 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 EXOGQ9Y2C4 368 aaKnown RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 AMDHD2Q9Y303 409 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 TMEM30CPA0ZSE6 113 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 YIF1AO95070 293 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 TMPRSS3P57727 454 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 CDC20Q12834 499 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 NCCRP1Q6ZVX7 275 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 FAM58AQ8N1B3 248 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 TMEM251Q8N6I4 163 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 AUNIPQ9H7T9 357 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 A0A0J9YW62 118 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 SULT1C2O00338 296 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 SERPINF1P36955 418 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 RPS27AP62979 156 aaKnown RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 UBA52P62987 128 aaKnown RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF529Q6P280 563 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 NPEPL1Q8NDH3 523 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms