RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 SCARB1Q8WTV0 552 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 ABHD3Q8WU67 409 aa10.13□□□□□ -0.79
PTPN2-201ENST00000309660 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
PTPN2-201ENST00000309660 EP300Q09472 2414 aaPredicted RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF407Q9C0G0 2248 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 hCG_1807616A0A1W2PRN6 198 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ADAP1O75689 374 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 CD37P11049 281 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 NTF4P34130 210 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 HTR5AP47898 357 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ECH1Q13011 328 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 TRA2AQ13595 282 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 PDCD1Q15116 288 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 MPPED2Q15777 294 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF660Q6AZW8 331 aaPredicted RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ELP2Q6IA86 826 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 RAB11FIP2Q7L804 512 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 C20orf196Q8IYI0 205 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM123Q8N131 208 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 DTWD2Q8NBA8 298 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 TERB2Q8NHR7 220 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 CT55Q8WUE5 264 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 NABP1Q96AH0 204 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 HDHD3Q9BSH5 251 aaPredicted RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 FN3KRPQ9HA64 309 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 P4HTMQ9NXG6 502 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 F5H0A9 414 aaPredicted RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 CSTBP04080 98 aaKnown RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 SERPINF1P36955 418 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ARPC4P59998 168 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 TAF9Q16594 264 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF529Q6P280 563 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 OR10D3Q8NH80 312 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 EDEM2Q9BV94 578 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 PLEKHJ1Q9NW61 149 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 GSKIPQ9P0R6 139 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 MBD2Q9UBB5 411 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 TTC28Q96AY4 2481 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 FAM221AA4D161 298 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 EFSO43281 561 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 MTRF1O75570 445 aaKnown RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 MELTFP08582 738 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ZNF32P17041 273 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 SUCLG1P53597 346 aaKnown RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 RSPO1Q2MKA7 263 aaPredicted RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 CEACAM16Q2WEN9 425 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 CHRFAM7AQ494W8 412 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 C11orf87Q6NUJ2 197 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ANGPTL6Q8NI99 470 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 NARS2Q96I59 477 aaKnown RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 SGCZQ96LD1 299 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 LINC00052Q96N35 136 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
PTPN2-201ENST00000309660 ACKR4Q9NPB9 350 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 SESN1Q9Y6P5 492 aa10.12□□□□□ -0.79
PTPN2-201ENST00000309660 GJE1A6NN92 205 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SIGLEC5O15389 551 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SERPINA5P05154 406 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 GSTP1P09211 210 aaKnown RBP10.11□□□□□ -0.79
PTPN2-201ENST00000309660 AGTR1P30556 359 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 CYB561P49447 251 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 FGL1Q08830 312 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SIGLEC14Q08ET2 396 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SLC51BQ86UW2 128 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 PDZD9Q8IXQ8 264 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
PTPN2-201ENST00000309660 THOC3Q96J01 351 aaKnown RBP10.11□□□□□ -0.79
PTPN2-201ENST00000309660 WDR13Q9H1Z4 485 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 DEPPQ9NTK1 212 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SPEF1Q9Y4P9 236 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 MAP1BP46821 2468 aaKnown RBP10.11□□□□□ -0.79
PTPN2-201ENST00000309660 RPA2P15927 270 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 ACKR3P25106 362 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 HOXA6P31267 233 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 OPRM1P35372 400 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 RAC3P60763 192 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 KCNMB1Q16558 191 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 C6orf15Q6UXA7 325 aaPredicted RBP10.11□□□□□ -0.79
PTPN2-201ENST00000309660 OR2W3Q7Z3T1 314 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 TMEM54Q969K7 222 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 SGK3Q96BR1 496 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 DMRTA2Q96SC8 542 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 FLVCR1Q9Y5Y0 555 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 BDP1A6H8Y1 2624 aa10.11□□□□□ -0.79
PTPN2-201ENST00000309660 LOC102725191A0A1B0GVB3 256 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 HOXB5P09067 269 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 GLRA1P23415 457 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 RPS27AP62979 156 aaKnown RBP10.1□□□□□ -0.79
PTPN2-201ENST00000309660 RSU1Q15404 277 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 LINC00696Q6ZRV3 163 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SLC16A14Q7RTX9 510 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 ZDHHC22Q8N966 263 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 GALNT11Q8NCW6 608 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 SEMA6DQ8NFY4 1073 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 MITD1Q8WV92 249 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 C17orf50Q8WW18 174 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 DCUN1D4Q92564 292 aa10.1□□□□□ -0.79
PTPN2-201ENST00000309660 REEP6Q96HR9 211 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms