RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SERPINA12Q8IW75 414 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 OR2Z1Q8NG97 314 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 OR13C9Q8NGT0 318 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 HPSE2Q8WWQ2 592 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 CHCHD6Q9BRQ6 235 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 TPK1Q9H3S4 243 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 EXOSC4Q9NPD3 245 aaKnown RBP23.09■■□□□ 1.29
HDAC3-201ENST00000305264 CSMD2Q7Z408 3487 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 POLQO75417 2590 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 OR8G1Q15617 311 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 PLCXD3Q63HM9 321 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 ZDHHC23Q8IYP9 409 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 ITPKCQ96DU7 683 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 FGF23Q9GZV9 251 aaPredicted RBP23.09■■□□□ 1.29
HDAC3-201ENST00000305264 MPC1Q9Y5U8 109 aa23.09■■□□□ 1.29
HDAC3-201ENST00000305264 TRAV8-7A0A075B6U6 113 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 C17orf100A8MU93 164 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 IGHV1-46P01743 117 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 UCHL1P09936 223 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 THRSPQ92748 146 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 CACNG6Q9BXT2 260 aa23.08■■□□□ 1.29
HDAC3-201ENST00000305264 IGKV1-9A0A0C4DH69 117 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 LOC100506127A0A0U1RQW1 187 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 C22orf42Q6IC83 251 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 MOB3CQ70IA8 216 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 UTS2BQ765I0 119 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 OR51A2Q8NGJ7 313 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 NPRL2Q8WTW4 380 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 IGFBPL1Q8WX77 278 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 ELMOD3Q96FG2 381 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 NAA50Q9GZZ1 169 aaKnown RBP23.07■■□□□ 1.28
HDAC3-201ENST00000305264 SLC22A4Q9H015 551 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 ZCCHC4Q9H5U6 513 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 F5H5P2 479 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 GALP22466 123 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 PPOXP50336 477 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 BLMHQ13867 455 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 OR5D14Q8NGL3 314 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 TXNL4BQ9NX01 149 aaKnown RBP23.07■■□□□ 1.28
HDAC3-201ENST00000305264 SSR3Q9UNL2 185 aa23.07■■□□□ 1.28
HDAC3-201ENST00000305264 USF3Q68DE3 2245 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 RAF1P04049 648 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 IGFBP3P17936 291 aaPredicted RBP23.06■■□□□ 1.28
HDAC3-201ENST00000305264 FSTP19883 344 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 GPR107Q5VW38 600 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 ZNF529Q6P280 563 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 OR8S1Q8NH09 359 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 OR5P3Q8WZ94 311 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 CCL19Q99731 98 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 MS4A5Q9H3V2 200 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 RNF167Q9H6Y7 350 aa23.06■■□□□ 1.28
HDAC3-201ENST00000305264 ANXA2P2A6NMY6 339 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 CALRP27797 417 aaKnown RBP23.05■■□□□ 1.28
HDAC3-201ENST00000305264 CDKN1AP38936 164 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 HSD17B12Q53GQ0 312 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 SLC16A12Q6ZSM3 486 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 VRK1Q99986 396 aaPredicted RBP23.05■■□□□ 1.28
HDAC3-201ENST00000305264 CENPOQ9BU64 300 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 ZDHHC8Q9ULC8 765 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 IGHV3-64DA0A0J9YX35 117 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 SULT1B1O43704 296 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 AIREO43918 545 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 FGF9P31371 208 aaPredicted RBP23.05■■□□□ 1.28
HDAC3-201ENST00000305264 CEACAM21Q3KPI0 293 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 SPRNQ5BIV9 151 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 TRMT10AQ8TBZ6 339 aaKnown RBP23.05■■□□□ 1.28
HDAC3-201ENST00000305264 CKLFQ9UBR5 152 aa23.05■■□□□ 1.28
HDAC3-201ENST00000305264 ADH4P08319 380 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 ATF1P18846 271 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 THBS2P35442 1172 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 TIMM50Q3ZCQ8 353 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 PAMR1Q6UXH9 720 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 OR1M1Q8NGA1 313 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 PHYHIPQ92561 330 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 PMF1-BGLAPU3KQ54 211 aa23.04■■□□□ 1.28
HDAC3-201ENST00000305264 CHD3Q12873 2000 aaKnown RBP23.04■■□□□ 1.28
HDAC3-201ENST00000305264 BMP4P12644 408 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 RAB3AP20336 220 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 LSM3P62310 102 aaKnown RBP23.03■■□□□ 1.28
HDAC3-201ENST00000305264 CCL8P80075 99 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 MAB21L1Q13394 359 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 ABCB9Q9NP78 766 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 NOP16Q9Y3C1 178 aaKnown RBP23.03■■□□□ 1.28
HDAC3-201ENST00000305264 ARL6IP5O75915 188 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 TGFBR1P36897 503 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 GPM6AP51674 278 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 PPP3R1P63098 170 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 CNN3Q15417 329 aaKnown RBP23.03■■□□□ 1.28
HDAC3-201ENST00000305264 WDR86Q86TI4 376 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 ANKRD13BQ86YJ7 626 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 HIST1H2AAQ96QV6 131 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 OR2V2Q96R30 315 aa23.03■■□□□ 1.28
HDAC3-201ENST00000305264 ASH1LQ9NR48 2969 aaKnown RBP23.02■■□□□ 1.28
HDAC3-201ENST00000305264 LOC100289279A0A1B0GTE1 492 aa23.02■■□□□ 1.28
HDAC3-201ENST00000305264 SHISA3A0PJX4 238 aa23.02■■□□□ 1.28
HDAC3-201ENST00000305264 OVOL3O00110 214 aa23.02■■□□□ 1.28
HDAC3-201ENST00000305264 NCR1O76036 304 aa23.02■■□□□ 1.28
HDAC3-201ENST00000305264 SRMP19623 302 aa23.02■■□□□ 1.28
HDAC3-201ENST00000305264 AZGP1P25311 298 aaKnown RBP23.02■■□□□ 1.28
HDAC3-201ENST00000305264 TNFAIP6P98066 277 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms