RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PIGTQ969N2 578 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 UBTD1Q9HAC8 227 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 VCX3AQ9NNX9 186 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 CBLN4Q9NTU7 201 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 TAS2R4Q9NYW5 299 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 STUB1Q9UNE7 303 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 DHDHQ9UQ10 334 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 CEPT1Q9Y6K0 416 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 HECTD1Q9ULT8 2610 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 PDZD2O15018 2839 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 DPPA5A6NC42 116 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 C17orf100A8MU93 164 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 RGS9O75916 674 aaPredicted RBP8.05□□□□□ -1.12
RFX3-201ENST00000302303 GABARAPO95166 117 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 NRASP01111 189 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 RAF1P04049 648 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 FSTP19883 344 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 PSMA1P25786 263 aaKnown RBP8.05□□□□□ -1.12
RFX3-201ENST00000302303 CLVS2Q5SYC1 327 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 C22orf42Q6IC83 251 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 TGIF2LYQ8IUE0 185 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 C11orf53Q8IXP5 236 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 FBXL14Q8N1E6 418 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 OR10AD1Q8NGE0 317 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 CHCHD6Q9BRQ6 235 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 GPR173Q9NS66 373 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 TMEM100Q9NV29 134 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 ENPP5Q9UJA9 477 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 LAMP3Q9UQV4 416 aa8.05□□□□□ -1.12
RFX3-201ENST00000302303 PQLC2LA1A4F0 135 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 F5H5P2 479 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 NDUFS7O75251 213 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 NCR1O76036 304 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 CD55P08174 381 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 ATF1P18846 271 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 SRMP19623 302 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 SSTR2P30874 369 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 PMELP40967 661 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 ZNF81P51508 661 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 CEACAM21Q3KPI0 293 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 AGAP6Q5VW22 663 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 FOXB2Q5VYV0 432 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 GPR141Q7Z602 305 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 OR5D14Q8NGL3 314 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 OR13C9Q8NGT0 318 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 OR13G1Q8NGZ3 307 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 TSEN15Q8WW01 171 aaKnown RBP8.04□□□□□ -1.12
RFX3-201ENST00000302303 PP6455Q8WZ26 134 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 PHYHIPQ92561 330 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 NKX3-1Q99801 234 aaPredicted RBP8.04□□□□□ -1.12
RFX3-201ENST00000302303 ZCCHC4Q9H5U6 513 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 FOXJ3Q9UPW0 622 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 MPC1Q9Y5U8 109 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 UNC79Q9P2D8 2635 aa8.04□□□□□ -1.12
RFX3-201ENST00000302303 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
RFX3-201ENST00000302303 TRAV1-2A0A0B4J238 106 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 A0A0G2JK05 382 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 A0A1W2PPW3 197 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 A6NHS1 94 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ANKRD30BLA7E2S9 258 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 VSTM5A8MXK1 200 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 M0R233 179 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SPRY3O43610 288 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 AIREO43918 545 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SERPINA3P01011 423 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CALRP27797 417 aaKnown RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 CD200P41217 278 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 PPOXP50336 477 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 NCS1P62166 190 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 HOXA4Q00056 320 aaPredicted RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 MPPED2Q15777 294 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 NKPD1Q17RQ9 610 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 GDPGP1Q6ZNW5 385 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 MOB3CQ70IA8 216 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 TMEM200AQ86VY9 491 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR2Z1Q8NG97 314 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR1M1Q8NGA1 313 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR52N4Q8NGI2 321 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 OR5A2Q8NGI9 324 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SORCS2Q96PQ0 1159 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SPACA5Q96QH8 159 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 PAPOLGQ9BWT3 736 aaKnown RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 CACNG6Q9BXT2 260 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 NKIRAS2Q9NYR9 191 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CGGBP1Q9UFW8 167 aaPredicted RBP8.03□□□□□ -1.12
RFX3-201ENST00000302303 DSCAMO60469 2012 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 AKAP6Q13023 2319 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 IGHV3-64DA0A0J9YX35 117 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 TRIM64BA6NI03 449 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 H7C417 338 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 SULT1B1O43704 296 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 HPXP02790 462 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ALDOBP05062 364 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CD2P06729 351 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 CLEC2LP0C7M8 214 aa8.03□□□□□ -1.12
RFX3-201ENST00000302303 ZNF20P17024 532 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms