RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PAQR4Q8N4S7 273 aaPredicted RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 SEH1LQ96EE3 360 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 STRADBQ9C0K7 418 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 COA4Q9NYJ1 87 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 FREM1Q5H8C1 2179 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 TMEM82A0PJX8 343 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 TMEM127O75204 238 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 RAC1P63000 192 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 CHST4Q8NCG5 386 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 PSMF1Q92530 271 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 DOCK7Q96N67 2140 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 PIGQQ9BRB3 760 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 RHBDD3Q9Y3P4 386 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 CXCL13O43927 109 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 ZNF17P17021 662 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 ZNF20P17024 532 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 AGTR1P30556 359 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 GUCA1AP43080 201 aaPredicted RBP19.27■□□□□ 0.68
TPM4-201ENST00000300933 B3GALT5-AS1P59052 145 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 UNC119Q13432 240 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 SNTB1Q13884 538 aaKnown RBP19.27■□□□□ 0.68
TPM4-201ENST00000300933 SSPNQ14714 243 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 LYPD6Q86Y78 171 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 KCNRGQ8N5I3 272 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 OR5D18Q8NGL1 313 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 TAAR9Q96RI9 348 aa19.27■□□□□ 0.68
TPM4-201ENST00000300933 CMSS1Q9BQ75 279 aaKnown RBP19.27■□□□□ 0.68
TPM4-201ENST00000300933 LOC100509620A0A075B734 347 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 A0A1W2PP11 408 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 TMEM218A2RU14 115 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 FAM25EA8MYX2 175 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 ANGPTL5Q86XS5 388 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 SVBPQ8N300 66 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 OR5D14Q8NGL3 314 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 SGCZQ96LD1 299 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 TINAGL1Q9GZM7 467 aaPredicted RBP19.27■□□□□ 0.67
TPM4-201ENST00000300933 KCNK7Q9Y2U2 307 aa19.27■□□□□ 0.67
TPM4-201ENST00000300933 MEGF11A6BM72 1044 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 LRRC3CA6NJW4 275 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 GLAP06280 429 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 DLSTP36957 453 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 SCGB2B2Q4G0G5 96 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 RAB12Q6IQ22 244 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 GALNT16Q8N428 558 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 PIGMQ9H3S5 423 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 COMMD9Q9P000 198 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 PLEKHA6Q9Y2H5 1048 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 NOP16Q9Y3C1 178 aaKnown RBP19.26■□□□□ 0.67
TPM4-201ENST00000300933 ZNHIT1O43257 154 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 BCL2L11O43521 198 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 IGHV3-9P01782 118 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 KCNJ3P48549 501 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 SCAND1P57086 179 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 CARD18P57730 90 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 SRSF3P84103 164 aaKnown RBP19.26■□□□□ 0.67
TPM4-201ENST00000300933 SCRN3Q0VDG4 424 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 ENDOGQ14249 297 aaKnown RBP19.26■□□□□ 0.67
TPM4-201ENST00000300933 PAN3Q58A45 887 aaKnown RBP19.26■□□□□ 0.67
TPM4-201ENST00000300933 CCDC36Q8IYA8 594 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 GABRG1Q8N1C3 465 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 GVQW1Q8N7I0 195 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 CLEC1AQ8NC01 280 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 ZNF845Q96IR2 970 aaPredicted RBP19.26■□□□□ 0.67
TPM4-201ENST00000300933 NICN1Q9BSH3 213 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 PLA2G3Q9NZ20 509 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 TNFSF18Q9UNG2 199 aa19.26■□□□□ 0.67
TPM4-201ENST00000300933 F5H0A9 414 aaPredicted RBP19.25■□□□□ 0.67
TPM4-201ENST00000300933 LDLRAD4O15165 306 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 AMY2AP04746 511 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 H2AFB1P0C5Y9 115 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 GDF1P27539 372 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 CFPP27918 469 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 CYB561P49447 251 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ATP1B3P54709 279 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 TMEM123Q8N131 208 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ULBP2Q9BZM5 246 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 FAM117AQ9C073 453 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 TMEM231Q9H6L2 316 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 BOD1L1Q8NFC6 3051 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 OR14I1A6ND48 311 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 PRSS44E7EML9 344 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 EIF1BO60739 113 aaKnown RBP19.25■□□□□ 0.67
TPM4-201ENST00000300933 RAB3DO95716 219 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ITGB2P05107 769 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 VSIG8P0DPA2 414 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 MSR1P21757 451 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ZNF93P35789 620 aaPredicted RBP19.25■□□□□ 0.67
TPM4-201ENST00000300933 CLDN15P56746 228 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 CSNK2A1P68400 391 aaPredicted RBP19.25■□□□□ 0.67
TPM4-201ENST00000300933 SRYQ05066 204 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 NKPD1Q17RQ9 610 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 C1orf100Q5SVJ3 147 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 C11orf87Q6NUJ2 197 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ZNF101Q8IZC7 436 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 GPX8Q8TED1 209 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 CCDC107Q8WV48 283 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 ALKBH3Q96Q83 286 aaPredicted RBP19.25■□□□□ 0.67
TPM4-201ENST00000300933 BANF2Q9H503 90 aa19.25■□□□□ 0.67
TPM4-201ENST00000300933 LOC102725191A0A1B0GVB3 256 aa19.24■□□□□ 0.67
TPM4-201ENST00000300933 DHHO43323 396 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms