RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SEH1LQ96EE3 360 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 KCNG2Q9UJ96 466 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 TMED7-TICAM2A0A0A6YYA0 188 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 XRCC2O43543 280 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 HOXB9P17482 250 aaPredicted RBP10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 NTF3P20783 257 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 DOC2BQ14184 412 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 MPPED2Q15777 294 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 TRMT12Q53H54 448 aaKnown RBP10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 OVCH2Q7RTZ1 564 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 BCORP1Q8N888 145 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 UHRF2Q96PU4 802 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 SMIM7Q9BQ49 75 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 WWTR1Q9GZV5 400 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 METTL9Q9H1A3 318 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 OPN4Q9UHM6 478 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 TMED7Q9Y3B3 224 aa10.21□□□□□ -0.77
NPC1L1-201ENST00000289547 LOC102725191A0A1B0GVB3 256 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 E5RGE8 158 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 CBR3O75828 277 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 MTCP1P56278 107 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 GRINAQ7Z429 371 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 CAMKMTQ7Z624 323 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 LINC00469Q8N7U9 141 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 OR4S1Q8NGB4 309 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 MARVELD3Q96A59 401 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 GNPNAT1Q96EK6 184 aaPredicted RBP10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 WDR34Q96EX3 536 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 FAM103A1Q9BTL3 118 aaKnown RBP10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 C1orf198Q9H425 327 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 PARD6AQ9NPB6 346 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 NSG2Q9Y328 171 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 A0A0A6YYD5 115 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 AWAT1Q58HT5 328 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 ACER2Q5QJU3 275 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 CMBLQ96DG6 245 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 ULBP2Q9BZM5 246 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 MTFP1Q9UDX5 166 aa10.21□□□□□ -0.78
NPC1L1-201ENST00000289547 TRAV36DV7A0A075B6V5 113 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 TRBV23-1A0A0A0MS06 115 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 C7orf66A4D0T2 115 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 NRG2O14511 850 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 LANCL1O43813 399 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 GLSO94925 669 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 SCGB2A2Q13296 93 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 ENDOGQ14249 297 aaKnown RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 DUSP5Q16690 384 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF429Q86V71 674 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC43A2Q8N370 569 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 C16orf52Q8NHV5 167 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 TSSK2Q96PF2 358 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 OPN1LWP04000 364 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 GALP22466 123 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 AADACP22760 399 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 DUSP1P28562 367 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 SUMO1P63165 101 aaKnown RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 PLA1AQ53H76 456 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 A4GNTQ9UNA3 340 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 MPC2O95563 127 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 CLDN1O95832 211 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 NID1P14543 1247 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 ACKR3P25106 362 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 CDK5Q00535 292 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 BRICD5Q6PL45 260 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 OR51I2Q9H344 312 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 BCL2L10Q9HD36 194 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 TRPM6Q9BX84 2022 aa10.2□□□□□ -0.78
NPC1L1-201ENST00000289547 RAB27BO00194 218 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CST2P09228 141 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 RAB5AP20339 215 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PRPH2P23942 346 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ECI1P42126 302 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 HMGA2P52926 109 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 BAXQ07812 192 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 KIAA0040Q15053 153 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ARHGAP11BQ3KRB8 267 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 OR2B11Q5JQS5 317 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SIGLECL1Q8N7X8 197 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CHST11Q9NPF2 352 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF71Q9NQZ8 489 aaPredicted RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CHRNA9Q9UGM1 479 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PROCRQ9UNN8 238 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 FOXJ3Q9UPW0 622 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 TANC1Q9C0D5 1861 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 A8MVM7 634 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 H0Y8G0 127 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CST4P01036 141 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 WNT3P56703 355 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PPP1CAP62136 330 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CNN3Q15417 329 aaKnown RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 AADACL3Q5VUY0 350 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms