RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PLCXD3Q63HM9 321 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 TMEM42Q69YG0 159 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF529Q6P280 563 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CRIP3Q6Q6R5 217 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 UNQ6126/PRO20091Q6UXV3 157 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 Q6ZR03 302 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 UBASH3BQ8TF42 649 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 RFT1Q96AA3 541 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 SLC25A46Q96AG3 418 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CHST5Q9GZS9 411 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 SLITRK2Q9H156 845 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 MSL2Q9HCI7 577 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CA10Q9NS85 328 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 PLEKHB1Q9UF11 243 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 KCNN3Q9UGI6 736 aa8.32□□□□□ -1.08
SNRNP40-201ENST00000263694 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 IGKV1-27A0A075B6S5 117 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 FAM230AA0A1W2PPH8 454 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 A0A1W2PPR1 153 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 DHRS7CA6NNS2 312 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 IQCF6A8MYZ5 107 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 TIMM8AO60220 97 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 HCKP08631 526 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OR4A8P0C604 315 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 KITLGP21583 273 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 BDKRB2P30411 391 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 PPP3R1P63098 170 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 IDNKQ5T6J7 187 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 UTS2BQ765I0 119 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 TPRA1Q86W33 373 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CCDC54Q8NEL0 328 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CSNK2A3Q8NEV1 391 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 NUP37Q8NFH4 326 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 HPSE2Q8WWQ2 592 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 PP6455Q8WZ26 134 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 THRSPQ92748 146 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 SLIRPQ9GZT3 109 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 KCNK15Q9H427 330 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OPA3Q9H6K4 179 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 TAAR3PQ9P1P4 343 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 DAPK2Q9UIK4 370 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CMAHPQ9Y471 501 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 RNF115Q9Y4L5 304 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 V9GY05 133 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CHD3Q12873 2000 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CLEC18AA5D8T8 446 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 ANKRD30BLA7E2S9 258 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 PDCD5O14737 125 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CST4P01036 141 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 IGHV3-13P01766 116 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 SELEP16581 610 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 AZGP1P25311 298 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 THBS2P35442 1172 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 ALDH3B1P43353 468 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 RORCP51449 518 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 MMP15P51511 669 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 GPM6AP51674 278 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 P2RY14Q15391 338 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 ZBTB37Q5TC79 503 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 SFXN4Q6P4A7 337 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CLEC18BQ6UXF7 455 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 ANGPTL5Q86XS5 388 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 JAGN1Q8N5M9 183 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CLEC18CQ8NCF0 446 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OR10AD1Q8NGE0 317 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 FAM222BQ8WU58 562 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 MRPL24Q96A35 216 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 C10orf35Q96D05 121 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 TMEM138Q9NPI0 162 aa8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 CISD1Q9NZ45 108 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-201ENST00000263694 LRBAP50851 2863 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 AKAP6Q13023 2319 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ARFGEF3Q5TH69 2177 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 IGLV3-9A0A075B6K5 115 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ZSCAN5BA6NJL1 495 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 IFITM5A6NNB3 132 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 F5H5P2 479 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 CTDSP2O14595 271 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 MLNRO43193 412 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PAHP00439 452 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PLATP00750 562 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PRF1P14222 555 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 TUBG1P23258 451 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 COL8A1P27658 744 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 OR3A4PP47883 348 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 PLA2G7Q13093 441 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 KISS1Q15726 138 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 DGUOKQ16854 277 aa8.3□□□□□ -1.08
SNRNP40-201ENST00000263694 ZNF672Q499Z4 452 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms