RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PABPC1L2AQ5JQF8 200 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 TGIF2LYQ8IUE0 185 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 PDGFBP01127 241 aaPredicted RBP10.9□□□□□ -0.67
SPG11-201ENST00000261866 GP2P55259 537 aaKnown RBP10.9□□□□□ -0.67
SPG11-201ENST00000261866 ISL1P61371 349 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 OR2A2Q6IF42 318 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 ACSM6Q6P461 480 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 LRRTM1Q86UE6 522 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 GALMQ96C23 342 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.67
SPG11-201ENST00000261866 TRAPPC4Q9Y296 219 aa10.9□□□□□ -0.67
SPG11-201ENST00000261866 COL22A1Q8NFW1 1626 aaPredicted RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 TCRBV5S2A0A599 114 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 WNT1P04628 370 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ERHP84090 104 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 C17orf78Q8N4C9 275 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 MDC1Q14676 2089 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 NKG7Q16617 165 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TSEN54Q7Z6J9 526 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ERGIC1Q969X5 290 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TMEM208Q9BTX3 173 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ISYNA1Q9NPH2 558 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TCFL5Q9UL49 500 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 IGHV5-10-1A0A0J9YXX1 117 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 C20orf202A1L168 122 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 CNR1P21554 472 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TNFAIP6P98066 277 aaPredicted RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 MICBQ29980 383 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 CBLN3Q6UW01 205 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 APH1BQ8WW43 257 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 PSD2Q9BQI7 771 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 RSRP1Q9BUV0 290 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 MBD1Q9UIS9 605 aaPredicted RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 M0R1X1 148 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ZNF32P17041 273 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ZNF85Q03923 595 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ZNF331Q9NQX6 463 aaPredicted RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 AK3Q9UIJ7 227 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 PMS2P2O95744 297 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 NQO2P16083 231 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 CEACAM6P40199 344 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 SEH1LQ96EE3 360 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 RPL13AP40429 203 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 SP6Q3SY56 376 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 ZNF628Q5EBL2 1059 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 HIST2H3AQ71DI3 136 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TMUB2Q71RG4 321 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 LYG1Q8N1E2 194 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 KCNRGQ8N5I3 272 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 TTC9Q92623 222 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 RPUSD4Q96CM3 377 aaKnown RBP10.89□□□□□ -0.67
SPG11-201ENST00000261866 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
SPG11-201ENST00000261866 C19orf57Q0VDD7 668 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 TRA2AQ13595 282 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPG11-201ENST00000261866 SMRP1Q8NCR6 262 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 GPR87Q9BY21 358 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 MOB1AQ9H8S9 216 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 ZNF701M0R085 212 aaPredicted RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 ATF1P18846 271 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 CMPK2Q5EBM0 449 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 BHLHA9Q7RTU4 235 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 TUSC5Q8IXB3 177 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 LRRC29Q8WV35 223 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 TM4SF19Q96DZ7 209 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 ZNF724A8MTY0 619 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DCTN6O00399 190 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 ADH4P08319 380 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 ZNF266Q14584 549 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 ETFDHQ16134 617 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DRAM2Q6UX65 266 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 APOBEC3DQ96AK3 386 aaPredicted RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 SOX7Q9BT81 388 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 KCNK15Q9H427 330 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 CHRM2P08172 466 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 EIF3IQ13347 325 aaKnown RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 C14orf79Q96F83 325 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 RHOBP62745 196 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 OR5H8P0DN80 308 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DCTDP32321 178 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DEFA6Q01524 100 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 TMEM267Q0VDI3 215 aaPredicted RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 TOR2AQ5JU69 321 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 DHRS7BQ6IAN0 325 aaPredicted RBP10.88□□□□□ -0.67
SPG11-201ENST00000261866 OR2G2Q8NGZ5 317 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 TSPAN32Q96QS1 320 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 GABRG3Q99928 467 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 SCN3AQ9NY46 2000 aa10.88□□□□□ -0.67
SPG11-201ENST00000261866 EPOPA6NHQ4 379 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms