RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MOGQ16653 247 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 C11orf71Q6IPW1 123 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 DTX2Q86UW9 622 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 ANKRD13BQ86YJ7 626 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 OR10AD1Q8NGE0 317 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 THRSPQ92748 146 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 RBM38Q9H0Z9 239 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CBLN4Q9NTU7 201 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 TMEM100Q9NV29 134 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 FAIMQ9NVQ4 179 aa13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 CGGBP1Q9UFW8 167 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-201ENST00000260054 IGKV1-9A0A0C4DH69 117 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 A0A1B0GWJ7 208 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 M0R233 179 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 IGFBP3P17936 291 aaPredicted RBP13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 FSTP19883 344 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 TIMM50Q3ZCQ8 353 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 AGAP6Q5VW22 663 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 UTS2BQ765I0 119 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 CLVS1Q8IUQ0 354 aaPredicted RBP13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 OR51A2Q8NGJ7 313 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 OR5D14Q8NGL3 314 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 HPSE2Q8WWQ2 592 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 PHYHIPQ92561 330 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 ITPKCQ96DU7 683 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 ADAT1Q9BUB4 502 aaKnown RBP13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 FGF23Q9GZV9 251 aaPredicted RBP13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 ZCCHC4Q9H5U6 513 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 LAMP3Q9UQV4 416 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 MPC1Q9Y5U8 109 aa13.46□□□□□ -0.26
CCDC90B-201ENST00000260054 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 SHISA3A0PJX4 238 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 GABARAPO95166 117 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 SSTR2P30874 369 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 TGFBR1P36897 503 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 ZNF81P51508 661 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 HSD17B12Q53GQ0 312 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 PLCXD3Q63HM9 321 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 ZNF529Q6P280 563 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 GDPGP1Q6ZNW5 385 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 MOB3CQ70IA8 216 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 ZDHHC23Q8IYP9 409 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 ZCCHC24Q8N2G6 241 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 OR13G1Q8NGZ3 307 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 TRAF4Q9BUZ4 470 aaPredicted RBP13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 CYSLTR2Q9NS75 346 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 CENPEQ02224 2701 aa13.45□□□□□ -0.26
CCDC90B-201ENST00000260054 SPRY3O43610 288 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 ARL6IP5O75915 188 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 IGHV1-46P01743 117 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 PRF1P14222 555 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 SRMP19623 302 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 OR8G1Q15617 311 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 CTF1Q16619 201 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 OR2Z1Q8NG97 314 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 OR1M1Q8NGA1 313 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 NPRL2Q8WTW4 380 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 OR5P3Q8WZ94 311 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 DYNLRB1Q9NP97 96 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 FOXJ3Q9UPW0 622 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 CEPT1Q9Y6K0 416 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 SULT1B1O43704 296 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 ATF1P18846 271 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 RAB3AP20336 220 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 CEACAM21Q3KPI0 293 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 ELMOD3Q96FG2 381 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 TPK1Q9H3S4 243 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 LIME1Q9H400 295 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 TCF7L1Q9HCS4 588 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 CKLFQ9UBR5 152 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 GSTK1Q9Y2Q3 226 aa13.44□□□□□ -0.26
CCDC90B-201ENST00000260054 ANXA2P2A6NMY6 339 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 F5H5P2 479 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 MAS1P04201 325 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 AZGP1P25311 298 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 THBS2P35442 1172 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 RANBP1P43487 201 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 VBP1P61758 197 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 NCS1P62166 190 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 PPP3R1P63098 170 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 C20orf204Q6ZNR8 217 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 RNF144BQ7Z419 303 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 LRRTM1Q86UE6 522 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 OR8S1Q8NH09 359 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 TRMT10AQ8TBZ6 339 aaKnown RBP13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 IGFBPL1Q8WX77 278 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 NRGNQ92686 78 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 KCTD7Q96MP8 289 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 MS4A5Q9H3V2 200 aa13.43□□□□□ -0.26
CCDC90B-201ENST00000260054 ZDHHC8Q9ULC8 765 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms