RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ACTG1P63261 375 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 PSG4Q00888 419 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 KISS1Q15726 138 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 ANKRD39Q53RE8 183 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 CCDC36Q8IYA8 594 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 AQP3Q92482 292 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 PIGTQ969N2 578 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
MBD4-201ENST00000249910 MEIKINA0A087WXM9 373 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 A0A096LPE4 126 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ZNF736B4DX44 427 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 SYNGR3O43761 229 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 CYTIPO60759 359 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 DHRS3O75911 302 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 SLC16A14Q7RTX9 510 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 SKA3Q8IX90 412 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 NAXEQ8NCW5 288 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ZNF431Q8TF32 576 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 PTX4Q96A99 478 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 PFDN2Q9UHV9 154 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 MRPS18CQ9Y3D5 142 aaKnown RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 SSX5O60225 188 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 SIX6O95475 246 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 LCATP04180 440 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 RAB6AP20340 208 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 HTR5AP47898 357 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 TAS2R19P59542 299 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 TMED4Q7Z7H5 227 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 TRAPPC6BQ86SZ2 158 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 CPT1CQ8TCG5 803 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 EXO5Q9H790 373 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 GPR35Q9HC97 309 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
MBD4-201ENST00000249910 B4GALT7Q9UBV7 327 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 KCNK7Q9Y2U2 307 aa12.87□□□□□ -0.35
MBD4-201ENST00000249910 NKX2-8O15522 239 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 CREBL2O60519 120 aaPredicted RBP12.86□□□□□ -0.35
MBD4-201ENST00000249910 IGLV3-1P01715 115 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 HPNP05981 417 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 LIPCP11150 499 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 CRYGSP22914 178 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 NLRC3Q7RTR2 1065 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
MBD4-201ENST00000249910 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 SLC7A10Q9NS82 523 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 ARID1AO14497 2285 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 A0A0U1RQV5 110 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 CDC14BO60729 498 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 PRAF2O60831 178 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 PLATP00750 562 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 SP1P08047 785 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 SSTR2P30874 369 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 MEOX1P50221 254 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 TMEM50BP56557 158 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 ZNF584Q8IVC4 421 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 OR1F12Q8NHA8 337 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 FBXW5Q969U6 566 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 FER1L6-AS2Q96M78 137 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 ELL3Q9HB65 397 aaPredicted RBP12.86□□□□□ -0.35
MBD4-201ENST00000249910 ZNF224Q9NZL3 707 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 LIPGQ9Y5X9 500 aa12.86□□□□□ -0.35
MBD4-201ENST00000249910 G3V3Q6 166 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
MBD4-201ENST00000249910 FCGR2AP12318 317 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 CCL2P13500 99 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 SELLP14151 372 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 ECH1Q13011 328 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
MBD4-201ENST00000249910 MUC20Q8N307 709 aaPredicted RBP12.85□□□□□ -0.35
MBD4-201ENST00000249910 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms