RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 SLC16A13Q7RTY0 426 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 HES7Q9BYE0 225 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 LPAR5Q9H1C0 372 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 SLC6A15Q9H2J7 730 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 MOB1AQ9H8S9 216 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
LRFN1-201ENST00000248668 NOP16Q9Y3C1 178 aaKnown RBP13.84□□□□□ -0.19
LRFN1-201ENST00000248668 STMND1H3BQB6 276 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 HLA-AP01891 365 aaKnown RBP13.83□□□□□ -0.19
LRFN1-201ENST00000248668 SERPINA2P20848 420 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 MECP2P51608 486 aaKnown RBP13.83□□□□□ -0.19
LRFN1-201ENST00000248668 GRB2P62993 217 aaKnown RBP13.83□□□□□ -0.19
LRFN1-201ENST00000248668 RSPO1Q2MKA7 263 aaPredicted RBP13.83□□□□□ -0.19
LRFN1-201ENST00000248668 PLAC9Q5JTB6 97 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 RAB12Q6IQ22 244 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 THOC3Q96J01 351 aaKnown RBP13.83□□□□□ -0.19
LRFN1-201ENST00000248668 TMEM59Q9BXS4 323 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 PIGLQ9Y2B2 252 aa13.83□□□□□ -0.19
LRFN1-201ENST00000248668 PLSCR5A0PG75 271 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 M0R135 149 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 CYC1P08574 325 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 AKR1C4P17516 323 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 RAB6AP20340 208 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 VAMP1P23763 118 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 C9orf135Q5VTT2 229 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 DOK3Q7L591 496 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 OR14K1Q8NGZ2 314 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 AKR7LQ8NHP1 331 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF799Q96GE5 643 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 BCL2L14Q9BZR8 327 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 ARL6Q9H0F7 186 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 CDC14BO60729 498 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 OR2A4O95047 310 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 ERCC1P07992 297 aaPredicted RBP13.83□□□□□ -0.2
LRFN1-201ENST00000248668 DHRS2Q13268 280 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 ATXN7L3Q14CW9 347 aaPredicted RBP13.83□□□□□ -0.2
LRFN1-201ENST00000248668 SWI5Q1ZZU3 235 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 TMEM88Q6PEY1 159 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 C3P1Q6ZMU1 363 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 RHOUQ7L0Q8 258 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 C12orf45Q8N5I9 185 aaPredicted RBP13.83□□□□□ -0.2
LRFN1-201ENST00000248668 DTWD2Q8NBA8 298 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 ARHGAP5-AS1Q96IT6 56 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 OR2A7Q96R45 310 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 UPB1Q9UBR1 384 aa13.83□□□□□ -0.2
LRFN1-201ENST00000248668 TMEM14DPA8MWL7 114 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 H7C2Y5 167 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 RAD51DO75771 328 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 RGS19P49795 217 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 B3GALT5-AS1P59052 145 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF774Q6NX45 483 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 CLRN3Q8NCR9 226 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 STEAP2Q8NFT2 490 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ABHD3Q8WU67 409 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 TMEM54Q969K7 222 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 RAB3CQ96E17 227 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 SGCZQ96LD1 299 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 GPR160Q9UJ42 338 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 LOC102725191A0A1B0GVB3 256 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 LRRC3CA6NJW4 275 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 DISC1C4P0D8 188 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 NMBP08949 121 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 FCGR2AP12318 317 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 PI3P19957 117 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ACP1P24666 158 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 FKBP2P26885 142 aaKnown RBP13.82□□□□□ -0.2
LRFN1-201ENST00000248668 CHAF1BQ13112 559 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 KISS1Q15726 138 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 UBE2V2Q15819 145 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF529Q6P280 563 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 OR10D3Q8NH80 312 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 C1orf147Q96MC9 270 aaPredicted RBP13.82□□□□□ -0.2
LRFN1-201ENST00000248668 DMRTA2Q96SC8 542 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 CST11Q9H112 138 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 OR2AT4A6NND4 320 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 MCRIP1C9JLW8 97 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 IFNA6P05013 189 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF84P51523 738 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 SSBP1Q04837 148 aaKnown RBP13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ARFRP1Q13795 201 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 KCNMB1Q16558 191 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF239Q16600 458 aaKnown RBP13.82□□□□□ -0.2
LRFN1-201ENST00000248668 ADAD2Q8NCV1 583 aaKnown RBP13.82□□□□□ -0.2
LRFN1-201ENST00000248668 CCDC107Q8WV48 283 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 PLEKHA6Q9Y2H5 1048 aa13.82□□□□□ -0.2
LRFN1-201ENST00000248668 A0A1W2PNU3 283 aaPredicted RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 B4E171 279 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 C9orf172C9J069 976 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 VAMP5O95183 116 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 TSPAN7P41732 249 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 CYB561P49447 251 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 TMEM50BP56557 158 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 SEC61A1P61619 476 aaKnown RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 LSM6P62312 80 aaKnown RBP13.81□□□□□ -0.2
LRFN1-201ENST00000248668 KCTD9Q7L273 389 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 OR51T1Q8NGJ9 327 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PTX4Q96A99 478 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 PNPLA2Q96AD5 504 aa13.81□□□□□ -0.2
LRFN1-201ENST00000248668 MRGPRFQ96AM1 343 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms