RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 SPTA1P02549 2419 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 SLC17A2O00624 439 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 TSPAN6O43657 245 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 GJB5O95377 273 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 IFNA21P01568 189 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 APODP05090 189 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 RPS27P42677 84 aaKnown RBP8.71□□□□□ -1.01
IRF1-201ENST00000245414 OR3A2P47893 321 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 PSEN2P49810 448 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 MPV17LQ2QL34 196 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 GRINAQ7Z429 371 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 C12orf76Q8N812 135 aaPredicted RBP8.71□□□□□ -1.01
IRF1-201ENST00000245414 ZNF709Q8N972 641 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 FNDC9Q8TBE3 224 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 SCRT1Q9BWW7 348 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 SLC7A11Q9UPY5 501 aa8.71□□□□□ -1.01
IRF1-201ENST00000245414 SFT2D2O95562 160 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OPN1MWP04001 364 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OPN1MW2P0DN77 364 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OPN1MW3P0DN78 364 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 SLC25A1P53007 311 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OR1Q1Q15612 314 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 MCEMP1Q8IX19 187 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 ZNF738Q8NE65 137 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OR51A2Q8NGJ7 313 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OR2G3Q8NGZ4 309 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 SCAMP4Q969E2 229 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 OR8B4Q96RC9 309 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.02
IRF1-201ENST00000245414 AK3Q9UIJ7 227 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 PADI3Q9ULW8 664 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 KCNK6Q9Y257 313 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 GREB1Q4ZG55 1949 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 A0A0G2JLL6 359 aaPredicted RBP8.71□□□□□ -1.02
IRF1-201ENST00000245414 C1QTNF3-AMACRE9PGA6 284 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 XRCC2O43543 280 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 GPR137BO60478 399 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 SRP19P09132 144 aaKnown RBP8.71□□□□□ -1.02
IRF1-201ENST00000245414 SCAND1P57086 179 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
IRF1-201ENST00000245414 ANKRD55Q3KP44 614 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 DUSP28Q4G0W2 176 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 GXYLT1Q4G148 440 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 FAM78AQ5JUQ0 283 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 PRRT2Q7Z6L0 340 aaPredicted RBP8.71□□□□□ -1.02
IRF1-201ENST00000245414 IL22RA1Q8N6P7 574 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 NUP43Q8NFH3 380 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 LHX3Q9UBR4 397 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 ZNF443Q9Y2A4 671 aaPredicted RBP8.71□□□□□ -1.02
IRF1-201ENST00000245414 CLDN16Q9Y5I7 305 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 PAPPA2Q9BXP8 1791 aa8.71□□□□□ -1.02
IRF1-201ENST00000245414 J3QW42 95 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 ZNF708P17019 499 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 SPOCK1Q08629 439 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 CTXN3Q4LDR2 81 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 GLB1LQ6UWU2 654 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 KMT5CQ86Y97 462 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 OR6N2Q8NGY6 317 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 TNFRSF14Q92956 283 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 CUTCQ9NTM9 273 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 FAM221AA4D161 298 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 MANSC4A6NHS7 340 aaPredicted RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 K7EP13 123 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 OPN1LWP04000 364 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 AKR1A1P14550 325 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 MRPL49Q13405 166 aaKnown RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 FZD2Q14332 565 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 ADIRFQ15847 76 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 TIFAQ96CG3 184 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 ZNF845Q96IR2 970 aaPredicted RBP8.7□□□□□ -1.02
IRF1-201ENST00000245414 IL17FQ96PD4 163 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 SLC2A9Q9NRM0 540 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 SCN5AQ14524 2016 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 CABIN1Q9Y6J0 2220 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 ATG2BQ96BY7 2078 aa8.7□□□□□ -1.02
IRF1-201ENST00000245414 A0A0U1RQV5 110 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 FEZF1A0PJY2 475 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 METTL12A8MUP2 240 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 TMPRSS11DO60235 418 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 CD1AP06126 327 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 TDGF1P13385 188 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 CORO1AP31146 461 aaKnown RBP8.69□□□□□ -1.02
IRF1-201ENST00000245414 RIPPLY3P57055 190 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 DPPA3Q6W0C5 159 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 TMEM184AQ6ZMB5 413 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 OR56A1Q8NGH5 318 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 RNF128Q8TEB7 428 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 ZNRF4Q8WWF5 429 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 GLYATL1Q969I3 302 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 ACY3Q96HD9 319 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 TSSK2Q96PF2 358 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 SMDT1Q9H4I9 107 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
IRF1-201ENST00000245414 PATZ1Q9HBE1 687 aaKnown RBP8.69□□□□□ -1.02
IRF1-201ENST00000245414 NPIPA5A0A0B4J1W7 369 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms