RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tox2A2A472 547 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc25a34A2ADF7 318 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Stard6P59096 233 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cox14Q8BH51 57 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Nt5mQ8VCE6 220 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Impa2Q91UZ5 290 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Crybg1A0A0G2JG52 2065 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 1700023F06RikA2AB62 382 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp799Q8BHK4 648 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Golt1bQ9CR60 138 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 NrapQ80XB4 1728 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Yjefn3F6W8I0 251 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tnfrsf17O88472 185 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 CapgP24452 352 aaKnown RBP15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cpeb4Q7TN98 729 aaKnown RBP15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Kcnd3Q9Z0V1 655 aa15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rbbp6P97868 1790 aaKnown RBP15.21■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm21818J3KMS6 170 aa15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 HbaP01942 142 aa15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ube2mP61082 183 aaKnown RBP15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Elavl1P70372 326 aaKnown RBP15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fbxw22Q5XG67 466 aa15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Oraov1Q8CH62 137 aa15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tas2r4Q9JKT3 297 aa15.21■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1223A0A1L1SU13 311 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ppp1r3dA2AJW4 279 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1018A2ASV3 311 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr653E9PVA0 317 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 P01915 264 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Prss36Q5K2P8 849 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zfp286Q8C0E6 519 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Seh1lQ8R2U0 360 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr669Q8VGU9 317 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 RabifQ91X96 123 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Raet1aO08602 253 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sox18P43680 377 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fut7Q11131 389 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Spata6Q3U6K5 488 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 ApoolQ78IK4 265 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Golt1aQ9DCQ3 133 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nudt3Q9JI46 168 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm8677K9J7G9 307 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc30a10Q3UVU3 470 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zfp663Q6NXM6 656 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc22a20Q80UJ1 556 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Scamp2Q9ERN0 329 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tmem8aQ9ESN3 769 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rhox7bA6PW38 321 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm45062E0CZ38 131 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r142K7N6U0 305 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Foxk1P42128 719 aaKnown RBP15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Scgb2b26Q8JZX1 112 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tmem218Q9CQ44 115 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 MeltfQ9R0R1 738 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm45861A0A1B0GRY3 1923 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Esp16A8R0U9 85 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Saxo1B1AXP3 476 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r75Q8R289 305 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr770Q8VGC2 311 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r43Q8VIC9 329 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Hoxa4P06798 285 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 A1bgQ19LI2 512 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm1527Q3V0P3 650 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 C1qtnf6Q6IR41 264 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr884Q7TRE1 309 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 CyrenQ8BHZ5 157 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ubqln3Q8C5U9 658 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm5218F6YH22 154 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nat2P50295 290 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rpl27P61358 136 aaKnown RBP15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Sorbs2Q3UTJ2 1180 aaKnown RBP15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rnase11Q5GAM9 192 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tusc1Q673H1 205 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr374Q7TRY0 313 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Adam4Q8CGQ2 763 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1089A0A1L1SRK6 311 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1248A0A1L1SSZ5 307 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r9A2RST7 299 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Hpse2B2RY83 592 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Il5P04401 133 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gjb5Q02739 271 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cd84Q18PI6 329 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gpr152Q8BXS7 511 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Elf5Q8VDK3 253 aa15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tppp3Q9CRB6 176 aaKnown RBP15.2■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Fam196aQ3USH1 422 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr582Q8VGV9 319 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr584Q8VGW0 319 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1389Q8VGX0 311 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Retreg3Q9CQV4 466 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Cacna1gQ5SUF7 2381 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Pcnx1Q9QYC1 2344 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr287E9PZS7 322 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Naa50Q6PGB6 169 aaKnown RBP15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ptbp3Q8BHD7 523 aaKnown RBP15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Maml2F6U238 1170 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Q9CQT9 129 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Btbd35f28A2CFD5 498 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 ErhP84089 104 aa15.19■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Zfp948Q6DFU8 667 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms