RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SF3B6Q9Y3B4 125 aaKnown RBP8.06□□□□□ -1.12
PHGDH-228ENST00000641847 ROS1P08922 2347 aa8.06□□□□□ -1.12
PHGDH-228ENST00000641847 LOC100506127A0A0U1RQW1 187 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 A0A1B0GTI1 187 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 hCG_38984A0A1B0GV85 526 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SERPINA3P01011 423 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 CD3EP07766 207 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SRD5A1P18405 259 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 NR4A1P22736 598 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 TTKP33981 857 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 RAD52P43351 418 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 PRSS12P56730 875 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 ERVS71-1P61550 626 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 PPP1CBP62140 327 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 RPS11P62280 158 aaKnown RBP eCLIP8.05□□□□□ -1.12
PHGDH-228ENST00000641847 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SLC22A25Q6T423 547 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 CLVS1Q8IUQ0 354 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-228ENST00000641847 MS4A15Q8N5U1 240 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 KBTBD8Q8NFY9 601 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 OR51A4Q8NGJ6 313 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 OR5L1Q8NGL2 311 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SLC25A40Q8TBP6 338 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 GPR148Q8TDV2 347 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 AKAP1Q92667 903 aaKnown RBP eCLIP8.05□□□□□ -1.12
PHGDH-228ENST00000641847 HS3ST6Q96QI5 342 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 CHCHD6Q9BRQ6 235 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SOX7Q9BT81 388 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 FUNDC2Q9BWH2 189 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 OR51E2Q9H255 320 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 OPA3Q9H6K4 179 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 ENPP5Q9UJA9 477 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 ZNF391Q9UJN7 358 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 HHLA2Q9UM44 414 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 DHDHQ9UQ10 334 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 LAMP3Q9UQV4 416 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 STARD10Q9Y365 291 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 SPEF1Q9Y4P9 236 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 PRR14LQ5THK1 2151 aa8.05□□□□□ -1.12
PHGDH-228ENST00000641847 TRBV5-5A0A0J9YX44 114 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 ZNF879B4DU55 563 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 HS3ST1O14792 307 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 LMX1BO60663 402 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 NOL3O60936 208 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 GPX5O75715 221 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 DHRS3O75911 302 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 GABARAPO95166 117 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 HLA-DPB1P04440 258 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 OCM2P0CE71 109 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 CFL1P23528 166 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 MAGEB1P43366 347 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 SOX2P48431 317 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 GSK3AP49840 483 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 RPS23P62266 143 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 FABP5Q01469 135 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 GK2Q14410 553 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 INSL4Q14641 139 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 HLXQ14774 488 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 TIMM50Q3ZCQ8 353 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 CD200R1LQ6Q8B3 271 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 VHLLQ6RSH7 139 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 C12orf54Q6X4T0 127 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 SLC16A12Q6ZSM3 486 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 PGAP1Q75T13 922 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 CEACAM19Q7Z692 300 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 OR13C3Q8NGS6 347 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 OR14K1Q8NGZ2 314 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 IGFBPL1Q8WX77 278 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 RPL3LQ92901 407 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 SPSB4Q96A44 273 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 OR14A2Q96R54 314 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 OR2J1Q9GZK6 312 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 NAA50Q9GZZ1 169 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 PLEKHA1Q9HB21 404 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 BARX1Q9HBU1 254 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 EXOSC4Q9NPD3 245 aaKnown RBP8.04□□□□□ -1.12
PHGDH-228ENST00000641847 SSR3Q9UNL2 185 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 RNF115Q9Y4L5 304 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 ATP23Q9Y6H3 246 aa8.04□□□□□ -1.12
PHGDH-228ENST00000641847 SMIM31A0A1B0GVY4 71 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TRDV1A0A1B0GX56 115 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 LOC390937A0A1W2PQ73 354 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 DPPA5A6NC42 116 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CCDC160A6NGH7 325 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 GGT3PA6NGU5 568 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 H3BSA7 217 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 GABRPO00591 440 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 AIREO43918 545 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 ZNF12P17014 697 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 ZNF20P17024 532 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 HNF1AP20823 631 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 TUBG1P23258 451 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 MAPK3P27361 379 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 LOXP28300 417 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 MPV17P39210 176 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 CRYBB2P43320 205 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 LSM3P62310 102 aaKnown RBP8.03□□□□□ -1.12
PHGDH-228ENST00000641847 FAM3AP98173 230 aa8.03□□□□□ -1.12
PHGDH-228ENST00000641847 OR8B8Q15620 311 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms