RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	CCL2	P13500	99 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	DRD1	P21728	446 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	CTSS	P25774	331 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	TFPI2	P48307	235 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	NPY4R	P50391	375 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	POLR2H	P52434	150 aa	Known RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	SLC17A1	Q14916	467 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	NFATC4	Q14934	902 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	PTGES3	Q15185	160 aa	Known RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	FAAP20	Q6NZ36	180 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	MED25	Q71SY5	747 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	PRSS41	Q7RTY9	318 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	RBM45	Q8IUH3	476 aa	Known RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	BEST3	Q8N1M1	668 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	KDM8	Q8N371	416 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	D2HGDH	Q8N465	521 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	SLC5A8	Q8N695	610 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	PLPP5	Q8NEB5	264 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	OR56A1	Q8NGH5	318 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	OR5D16	Q8NGK9	328 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	OR5W2	Q8NH69	310 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	ASB17	Q8WXJ9	295 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	MCHR2	Q969V1	340 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	RAB39B	Q96DA2	213 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	CITED2	Q99967	270 aa	Predicted RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	CCDC3	Q9BQI4	270 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	LRFN3	Q9BTN0	628 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	GPR174	Q9BXC1	333 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	ACTRT3	Q9BYD9	372 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	SLCO5A1	Q9H2Y9	848 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	RERGL	Q9H628	205 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	CNTD2	Q9H8S5	307 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	SIRT3	Q9NTG7	399 aa	Predicted RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	RLIM	Q9NVW2	624 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	COMMD9	Q9P000	198 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	KCNE3	Q9Y6H6	103 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	COX11	Q9Y6N1	276 aa		7.11	□□□□□ -1.27
RTTN-223	ENST00000640931	ANKUB1	A6NFN9	424 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ANKRD61	A6NGH8	418 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TNFRSF11B	O00300	401 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	HYAL3	O43820	417 aa	Predicted RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ERAL1	O75616	437 aa	Known RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TNFSF13	O75888	250 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SEMA4F	O95754	770 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SLC35G6	P0C7Q6	338 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	PGA3	P0DJD8	388 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SSR2	P43308	183 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	H3F3A	P84243	136 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	CDK5	Q00535	292 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ID2	Q02363	134 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FZD5	Q13467	585 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	BATF	Q16520	125 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	C2orf68	Q2NKX9	166 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	OR4C11	Q6IEV9	310 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	BTNL8	Q6UX41	500 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TMPPE	Q6ZT21	453 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TTLL10	Q6ZVT0	673 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	CBLL1	Q75N03	491 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	OR4N5	Q8IXE1	308 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	CMTM1	Q8IZ96	169 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FLVCR1-AS1	Q8TAF5	88 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	THAP4	Q8WY91	577 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SCARF2	Q96GP6	870 aa	Predicted RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	JSRP1	Q96MG2	331 aa	Predicted RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SCN2A	Q99250	2005 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	NKX3-1	Q99801	234 aa	Predicted RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TSSK6	Q9BXA6	273 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FOXQ1	Q9C009	403 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	THSD1	Q9NS62	852 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	UPB1	Q9UBR1	384 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FTSJ1	Q9UET6	329 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	IKZF2	Q9UKS7	526 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	RAB22A	Q9UL26	194 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	MUC3A	Q02505	3323 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931		A0A0A6YYD5	115 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SHISA3	A0PJX4	238 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931		B9A039	149 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931		C9JQL5	133 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	SOCS6	O14544	535 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ZNF749	O43361	778 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	TRGC2	P03986	189 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	OR5G3	P0C626	314 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	LIPC	P11150	499 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FGF5	P12034	268 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	IL11	P20809	199 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	HNRNPA2B1	P22626	353 aa	Known RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ZBTB25	P24278	435 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	FPR2	P25090	351 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	MANF	P55145	182 aa	Known RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	UBE2K	P61086	200 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	BTN3A2	P78410	334 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	MRPS21	P82921	87 aa	Known RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	OC90	Q02509	493 aa	Predicted RBP	7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ELOB	Q15370	118 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	ZIC1	Q15915	447 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	MAPK14	Q16539	360 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	PLAC9	Q5JTB6	97 aa		7.1	□□□□□ -1.27
RTTN-223	ENST00000640931	DNM1P34	Q6PK57	102 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms