RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 GLDNQ6ZMI3 551 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-223ENST00000640640 C9orf40Q8IXQ3 194 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 WDR89Q96FK6 387 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-223ENST00000640640 PRSS27Q9BQR3 290 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 BIN3Q9NQY0 253 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 EDARQ9UNE0 448 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 SCN2AQ99250 2005 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 SCGB2A1O75556 95 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 NXPH3O95157 252 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 SEMG1P04279 462 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 SNTB1Q13884 538 aaKnown RBP15.69■□□□□ 0.1
SCARB2-223ENST00000640640 PPP1R1CQ8WVI7 109 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 APOBEC3DQ96AK3 386 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-223ENST00000640640 WFDC6Q9BQY6 131 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
SCARB2-223ENST00000640640 RALGAPA2Q2PPJ7 1873 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 LRP5LA4QPB2 252 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 IFNA10P01566 189 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 M6PRP20645 277 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 DUSP1P28562 367 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 TAS2R30P59541 319 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 FBXL14Q8N1E6 418 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 MARC2Q969Z3 335 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 TRGV5A0A0B4J1U4 118 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 IGKV1D-16P01601 117 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 HBE1P02100 147 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 EIF2S3P41091 472 aaKnown RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 RAG2P55895 527 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 TAF9BQ9HBM6 251 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 PROCRQ9UNN8 238 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 RIF1Q5UIP0 2472 aaKnown RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 TMEM272A0A1B0GTI8 110 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 C4orf51C9J302 202 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 RRP8O43159 456 aaKnown RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 COL13A1Q5TAT6 717 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 C17orf107Q6ZR85 190 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 OR10D3Q8NH80 312 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 RTN4IP1Q8WWV3 396 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-223ENST00000640640 MIXL1Q9H2W2 232 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 FRRS1LQ9P0K9 344 aa15.68■□□□□ 0.1
SCARB2-223ENST00000640640 PRRG2O14669 202 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 OIP5O43482 229 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 ZNF32P17041 273 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 RPL35P42766 123 aaKnown RBP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 S100A12P80511 92 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 VASH2Q86V25 355 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 OR6X1Q8NH79 312 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 TMED6Q8WW62 240 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 ZC3HAV1LQ96H79 300 aaKnown RBP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 R4GN57 208 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 V9GYH0 126 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 ABCA7Q8IZY2 2146 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 TMEM265A0A087WTH1 108 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 IGHV5-10-1A0A0J9YXX1 117 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 SIRPB1O00241 398 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 SH2D1BO14796 132 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 DHRS3O75911 302 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 RGS11O94810 467 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 TLE4Q04727 773 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 UBL7Q96S82 380 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 SLC23A1Q9UHI7 598 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 PUS1Q9Y606 427 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 RTTNQ86VV8 2226 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 LIPT2A6NK58 231 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 FABP6P51161 128 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 TMEM128Q5BJH2 165 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 NLRC3Q7RTR2 1065 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 ST8SIA4Q92187 359 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 HAS2Q92819 552 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 YIPF5Q969M3 257 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 S100PBPQ96BU1 408 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 CMBLQ96DG6 245 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 GFOD1Q9NXC2 390 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 FIGNL2A6NMB9 653 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 PTP4A3O75365 173 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 TGM6O95932 706 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 CD300CQ08708 224 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 CDC20BQ86Y33 519 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 OR52N4Q8NGI2 321 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 OR2AE1Q8NHA4 323 aa15.67■□□□□ 0.1
SCARB2-223ENST00000640640 MSI2Q96DH6 328 aaKnown RBP15.67■□□□□ 0.1
SCARB2-223ENST00000640640 OR4C45A6NMZ5 311 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 PATE3B3GLJ2 98 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 ACSM4P0C7M7 580 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 SPEM2Q0P670 501 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 SOHLH1Q5JUK2 328 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 TMEM91Q6ZNR0 172 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 KCNRGQ8N5I3 272 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 OR4A16Q8NH70 328 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 HEYLQ9NQ87 328 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-223ENST00000640640 SDHBP21912 280 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 AADACP22760 399 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 PIGPP57054 158 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 B3GNTL1Q67FW5 361 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-223ENST00000640640 ZNF774Q6NX45 483 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 TSEN54Q7Z6J9 526 aaKnown RBP15.66■□□□□ 0.1
SCARB2-223ENST00000640640 MEIKINA0A087WXM9 373 aa15.66■□□□□ 0.1
SCARB2-223ENST00000640640 NOVA1P51513 510 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms