RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PRRX2Q99811 253 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 TEX101Q9BY14 249 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 DEFB127Q9H1M4 99 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 KCNE1BA0A087WTH5 132 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 B4GALT1P15291 398 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 FCER1GP30273 86 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 WDR38Q5JTN6 314 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 TMPRSS11FQ6ZWK6 438 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 NOXO1Q8NFA2 376 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-213ENST00000638680 CXCL13O43927 109 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 GALP22466 123 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 SP6Q3SY56 376 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 PELI1Q96FA3 418 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 CST4P01036 141 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 FAM157BP0CG42 384 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 G0S2P27469 103 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 CSN1S1P47710 185 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 LGALS4P56470 323 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 DUSP2Q05923 314 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 LSRQ86X29 649 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-213ENST00000638680 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
SCARB2-213ENST00000638680 PINX1Q96BK5 328 aaKnown RBP16.64■□□□□ 0.25
SCARB2-213ENST00000638680 GPANK1O95872 356 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF816Q0VGE8 651 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 TOMM34Q15785 309 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 CXorf58Q96LI9 332 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF230Q9UIE0 474 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 PPP1R1AQ13522 171 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 FAM96BQ9Y3D0 163 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 HYAL3O43820 417 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 DHRS2Q13268 280 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 RTL8BQ17RB0 113 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF687Q8N1G0 1237 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 SPICQ8N5J4 248 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 MARVELD1Q9BSK0 173 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 UCK1Q9HA47 277 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 PRDM7Q9NQW5 492 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 MBTPS2O43462 519 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 THBS4P35443 961 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 KCNJ3P48549 501 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 RPL11P62913 178 aaKnown RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 INSM1Q01101 510 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-213ENST00000638680 UBE3DQ7Z6J8 389 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 MTFP1Q9UDX5 166 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 OR5V1Q9UGF6 321 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 TAF1P21675 1872 aa16.63■□□□□ 0.25
SCARB2-213ENST00000638680 C6orf15Q6UXA7 325 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF574Q6ZN55 896 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-213ENST00000638680 TAAR6Q96RI8 345 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 MMP17Q9ULZ9 603 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 GFERP55789 205 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 RAB35Q15286 201 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 PRR27Q6MZM9 219 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 OR10D4PQ8NGN7 298 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 CBY1Q9Y3M2 126 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 TPPP2P59282 170 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 PJVKQ0ZLH3 352 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 ST6GAL2Q96JF0 529 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 IGHA2P01877 340 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 CD96P40200 585 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 OR10X1Q8NGY0 326 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 BOD1Q96IK1 185 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 DHHO43323 396 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 ZFPL1O95159 310 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 RAG2P55895 527 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 SHHQ15465 462 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 PLA1AQ53H76 456 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 KCNE4Q8WWG9 221 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 HLA-CQ95604 372 aa16.62■□□□□ 0.25
SCARB2-213ENST00000638680 TERTO14746 1132 aaKnown RBP16.61■□□□□ 0.25
SCARB2-213ENST00000638680 GALR2O43603 387 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-213ENST00000638680 CTAG2O75638 210 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ADH4P08319 380 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 SPP1P10451 314 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF793Q6ZN11 406 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ZNRF4Q8WWF5 429 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ZNF17P17021 662 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 CCR2P41597 374 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 FUT6P51993 359 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 GPR37O15354 613 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 SLC25A1P53007 311 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 CLDN15P56746 228 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 AKR7LQ8NHP1 331 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 C9orf170A2RU37 121 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ANKUB1A6NFN9 424 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 RAB13P51153 203 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 CLN3Q13286 438 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 FAM53BQ14153 422 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 C17orf47Q8NEP4 570 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 ADGRG7Q96K78 797 aa16.61■□□□□ 0.25
SCARB2-213ENST00000638680 CRYM-AS1A6NIL9 109 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 ARHGAP5-AS1Q96IT6 56 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 RAB18Q9NP72 206 aa16.6■□□□□ 0.25
SCARB2-213ENST00000638680 PARD6AQ9NPB6 346 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms