RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 FPR2P25090 351 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CSNK1EP49674 416 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 S100A10P60903 97 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 GRB2P62993 217 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 HSD11B2P80365 405 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 HSF1Q00613 529 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 TLE1Q04724 770 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PPP1R1AQ13522 171 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FZD2Q14332 565 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SURF2Q15527 256 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OR7A5Q15622 319 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ETFDHQ16134 617 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 HES3Q5TGS1 186 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 JMJD6Q6NYC1 403 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CBLN3Q6UW01 205 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RHOUQ7L0Q8 258 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 DOK3Q7L591 496 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 KMT5CQ86Y97 462 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 COMMD1Q8N668 190 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF283Q8N7M2 679 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 TERB2Q8NHR7 220 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PAQR8Q8TEZ7 354 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ZNRF4Q8WWF5 429 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FGF14Q92915 247 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SLAMF6Q96DU3 332 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 C2orf50Q96LR7 162 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 HS3ST6Q96QI5 342 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SELENOIQ9C0D9 397 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 KLRF1Q9NZS2 232 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FBLN5Q9UBX5 448 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PCDHB10Q9UN67 800 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SCN2AQ99250 2005 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 KIAA1549Q9HCM3 1950 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FITM1A5D6W6 292 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OIP5O43482 229 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CD99P14209 185 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CTLA4P16410 223 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 IGFBP3P17936 291 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ABCD3P28288 659 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 HRH1P35367 487 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SERPINF1P36955 418 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RAB2AP61019 212 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CSNK2A1P68400 391 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 POU3F1Q03052 451 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 MFGE8Q08431 387 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 MELKQ14680 651 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 EBPQ15125 230 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FAM166AQ6J272 317 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PRSS54Q6PEW0 395 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OPN5Q6U736 354 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 C17orf107Q6ZR85 190 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SGPP2Q8IWX5 399 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CSNK2A3Q8NEV1 391 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OR4D10Q8NGI6 311 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OR51A4Q8NGJ6 313 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OR1N1Q8NGS0 311 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FNDC9Q8TBE3 224 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SLC25A43Q8WUT9 341 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RNF133Q8WVZ7 376 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ASB10Q8WXI3 467 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 EMG1Q92979 244 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF285Q96NJ3 590 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 MICU1Q9BPX6 476 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PBDC1Q9BVG4 233 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PTGES2Q9H7Z7 377 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SEC61A2Q9H9S3 476 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 KPTNQ9Y664 436 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RALGAPA1Q6GYQ0 2036 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 A0A1W2PPC4 97 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 LOC390937A0A1W2PQ73 354 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 FIGNL2A6NMB9 653 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 C1orf196B1AJZ1 125 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PRR32B1ATL7 298 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 DCTN6O00399 190 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CCSO14618 274 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SMAD9O15198 467 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 CRTAPO75718 401 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SFT2D2O95562 160 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 GABRG2P18507 467 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ACP1P24666 158 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 LAP3P28838 519 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RPS27P42677 84 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF133P52736 654 aaPredicted RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ATP1B3P54709 279 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 RPS15P62841 145 aaKnown RBP3.54□□□□□ -1.84
SCN1A-214ENST00000637038 EGR4Q05215 589 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PJVKQ0ZLH3 352 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ODF1Q14990 250 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 PEA15Q15121 130 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 ABCA11PQ4W5N1 156 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 VAX1Q5SQQ9 334 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 H3F3CQ6NXT2 135 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 DRAM2Q6UX65 266 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 NAA40Q86UY6 237 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 SLC26A10Q8NG04 563 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 OR13C9Q8NGT0 318 aa3.54□□□□□ -1.84
SCN1A-214ENST00000637038 GPR119Q8TDV5 335 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms