RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TEX37Q96LM6 180 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 UMAD1C9J7I0 102 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 H7C2G1 150 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 ACTL6AO96019 429 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 ATP1B1P05026 303 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 SUMO1P63165 101 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 MRPS10P82664 201 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 RNF141Q8WVD5 230 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 HS3ST2Q9Y278 367 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 B3GALT5Q9Y2C3 310 aa16.08■□□□□ 0.16
CACNA1A-227ENST00000636549 HPP00738 406 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 ARG1P05089 322 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 FGF4P08620 206 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 LIPNQ5VXI9 398 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CLEC9AQ6UXN8 241 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 M0R296 226 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 RFX2P48378 723 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 NHLH1Q02575 133 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 NHLH2Q02577 135 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 VMA21Q3ZAQ7 101 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 PRSS35Q8N3Z0 413 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 LRRC29Q8WV35 223 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CLDN23Q96B33 292 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CDX2Q99626 313 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 RAB18Q9NP72 206 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CELA2BP08218 269 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 LGALS7P47929 136 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CDK5Q00535 292 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF793Q6ZN11 406 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CABLES2Q9BTV7 478 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 BMP2P12643 396 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 SULT1A1P50225 295 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 MARCH1Q8TCQ1 289 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 METTL12A8MUP2 240 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 TGFBR1P36897 503 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 GUCA2AQ02747 115 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 ELFN2Q5R3F8 820 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 OR4F17Q8NGA8 305 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 OR52I2Q8NH67 350 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 ATOH8Q96SQ7 321 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 A4GALTQ9NPC4 353 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 CORINQ9Y5Q5 1042 aa16.07■□□□□ 0.16
CACNA1A-227ENST00000636549 OR5AL1P0C617 328 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF628Q5EBL2 1059 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF620Q6ZNG0 422 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 OR1L3Q8NH93 324 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 ADGRG7Q96K78 797 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 DLL4Q9NR61 685 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 TCFL5Q9UL49 500 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 PPP5D1E7EU14 171 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 MMP11P24347 488 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 REG1BP48304 166 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 TMUB1Q9BVT8 246 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 ISG20L2Q9H9L3 353 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 SLCO1C1Q9NYB5 712 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 PLAUP00749 431 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 CD3EP07766 207 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 TIGITQ495A1 244 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 TMEM97Q5BJF2 176 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 SLC36A1Q7Z2H8 476 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 RPS4XP62701 263 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 LY6EQ16553 131 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 C5orf46Q6UWT4 87 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 RETREG3Q86VR2 466 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 PSD2Q9BQI7 771 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 MYOM1P52179 1685 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 TMSB15BA0A087X1C1 80 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 DFFBO76075 338 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 DHRS11Q6UWP2 260 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 OSR2Q8N2R0 312 aa16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 KTI12Q96EK9 354 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-227ENST00000636549 ZNF354AO60765 605 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 PAQR9Q6ZVX9 377 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 NHLRC2Q8NBF2 726 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 RALYQ9UKM9 306 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 TCRBP04435 133 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 SELENBP1Q13228 472 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 ARHGDIGQ99819 225 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 ADAM29Q9UKF5 820 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 DAPP1Q9UN19 280 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 A0A1W2PPQ1 181 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 GCSHP23434 173 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 CCR2P41597 374 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 ECI1P42126 302 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 NSUN5P2Q63ZY6 315 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 OR13C8Q8NGS7 320 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 SDF2Q99470 211 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 KIR2DS1A0A191URI9 304 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 UBE2L6O14933 153 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 MT-ND4LP03901 98 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 ARNTP27540 789 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 KIR2DS4P43632 304 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 KIR2DS1Q14954 304 aa16.05■□□□□ 0.16
CACNA1A-227ENST00000636549 PLK5Q496M5 336 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms