RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MED1Q15648 1581 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TRAV21A0A0B4J279 112 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 WNT9BO14905 357 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CDC14BO60729 498 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SCG5P05408 212 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PSMB1P20618 241 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MDH2P40926 338 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BCL7AQ4VC05 210 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 EMC4Q5J8M3 183 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC25A42Q86VD7 318 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CLDN22Q8N7P3 220 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BHLHE23Q8NDY6 225 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 OR10V1Q8NGI7 309 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF502Q8TBZ5 544 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 KHSRPQ92945 711 aaKnown RBP eCLIP5.48□□□□□ -1.532e-6■■■□□ 17.2
SCN1A-212ENST00000636194 HSD17B14Q9BPX1 270 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TPSD1Q9BZJ3 242 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 NOX4Q9NPH5 578 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM9BQ9NQ34 198 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TNS2Q63HR2 1409 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TRAV34A0A0B4J273 112 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 A0A1W2PPQ1 181 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SOX15O60248 233 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CRHP06850 196 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 LIMS3P0CW19 117 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 LIMS4P0CW20 117 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BAK1Q16611 211 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC35D3Q5M8T2 416 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF324BQ6AW86 544 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 LAMTOR1Q6IAA8 161 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TIFABQ6ZNK6 161 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 VSTM2AQ8TAG5 236 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 KREMEN1Q96MU8 473 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 VCX2Q9H322 139 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 NXT2Q9NPJ8 142 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 NRXN1Q9ULB1 1477 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 LRRC10BA6NIK2 292 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ISLRO14498 428 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 KCNAB3O43448 404 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TNFSF10P50591 281 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC30A3Q99726 388 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC52A3Q9NQ40 469 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLCO1C1Q9NYB5 712 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PSENENQ9NZ42 101 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MMP24Q9Y5R2 645 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TSC2P49815 1807 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 A0A0D9SEW6 157 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 COCHO43405 550 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 HAND1O96004 215 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 IL1R2P27930 398 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BSGP35613 385 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 NPBWR2P48146 333 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PLP1P60201 277 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SYPL2Q5VXT5 272 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FAM53AQ6NSI3 398 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM108Q6UXF1 575 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BPIFA4PQ86YQ2 179 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC38A9Q8NBW4 561 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SLC35B4Q969S0 331 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 IGSF21Q96ID5 467 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 C16orf70Q9BSU1 422 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TAAR2Q9P1P5 351 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 BTNL2Q9UIR0 455 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CREBBPQ92793 2442 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 K7ESF4 209 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PDE6DO43924 150 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FZD6O60353 706 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CACNG3O60359 315 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TBX10O75333 385 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 GPR32O75388 356 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FCGR3AP08637 254 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FTH1P19P0C7X4 201 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FPR2P25090 351 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SHC1P29353 583 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MEIG1Q5JSS6 88 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF648Q5T619 568 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF761Q86XN6 746 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 IGDCC3Q8IVU1 814 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MRGPRDQ8TDS7 321 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 COA4Q9NYJ1 87 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TEX264Q9Y6I9 313 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 DISP1Q96F81 1524 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 DDX60Q8IY21 1712 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 N4BP2Q86UW6 1770 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MEGF6O75095 1541 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TRAV27A0A087WT01 109 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SHISA7A6NL88 538 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MFNGO00587 321 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 GPR75O95800 540 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 HMGA2P52926 109 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 PPIAP62937 165 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 RELQ04864 619 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM249Q2WGJ8 235 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 DEFB110Q30KQ9 67 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 RNFT1Q5M7Z0 435 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MRPL2Q5T653 305 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CDCA2Q69YH5 1023 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 CSNK1G1Q9HCP0 422 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms