RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DDAH2O95865 285 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 GLRA1P23415 457 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 LAP3P28838 519 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 AKR1C3P42330 323 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 RAB1AP62820 205 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 CSNK2A1P68400 391 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 MS4A18Q3C1V0 323 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 OR1J1Q8NGS3 322 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 SNIP1Q8TAD8 396 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 C1orf147Q96MC9 270 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 PRRX2Q99811 253 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 A6NLC8 198 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 ZNF354AO60765 605 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 DEDDO75618 318 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 IFNA21P01568 189 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 SEC11BP0C7V7 166 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 CTSEP14091 401 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 BCKDHBP21953 392 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM33P57088 247 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 GUK1Q16774 197 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 HIST2H3AQ71DI3 136 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 FOXQ1Q9C009 403 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 EHFQ9NZC4 300 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 LUZP4Q9P127 313 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 A0A1W2PPE3 182 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 RAD51DO75771 328 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 HTR3BO95264 441 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 WISP1O95388 367 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 SNU13P55769 128 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 HSD11B2P80365 405 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 ARL6IP1Q15041 203 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 OR2A2Q6IF42 318 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 FOXRED2Q8IWF2 684 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 MFSD8Q8NHS3 518 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 MRGPRX1Q96LB2 322 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 ARV1Q9H2C2 271 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 PISDQ9UG56 409 aa13.1□□□□□ -0.31
CACNA1A-220ENST00000635988 BORCS7-ASMTA0A0B4J1R7 106 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 A0A1W2PPH5 198 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 C17orf51A8MQB3 221 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 IFNA17P01571 189 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 FBP1P09467 338 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 OR8U8P0C7N1 319 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 PRF1P14222 555 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 ID4P47928 161 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 RAB5CP51148 216 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 ZNF84P51523 738 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 HSF1Q00613 529 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 C1QL4Q86Z23 238 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 FAM89BQ8N5H3 189 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 ST6GALNAC5Q9BVH7 336 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 BANF2Q9H503 90 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 SPACA1Q9HBV2 294 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 CUTCQ9NTM9 273 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM131Q92545 1883 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 CDC14CA4D256 554 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 TXNL1O43396 289 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 CLN5O75503 358 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 MAS1LP35410 378 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 THBS4P35443 961 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 OR3A4PP47883 348 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 GABRA4P48169 554 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 SPEM2Q0P670 501 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 MIDNQ504T8 468 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 SLC22A18ASQ8N1D0 253 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 GPER1Q99527 375 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 PBDC1Q9BVG4 233 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 AMDHD2Q9Y303 409 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 LRP4O75096 1905 aa13.09□□□□□ -0.31
CACNA1A-220ENST00000635988 IGKV3D-11A0A0A0MRZ8 115 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 IGKV1D-43A0A0B4J1Z2 117 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 HCKP08631 526 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 DANCRP0C864 163 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 EIF3IQ13347 325 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 PPA1Q15181 289 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 CHRFAM7AQ494W8 412 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms