RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RAD51DO75771 328 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 HCKP08631 526 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 GUCA1AP43080 201 aaPredicted RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 PTGFRP43088 359 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 CBX5P45973 191 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 IL13RA1P78552 427 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 KISS1Q15726 138 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 MICBQ29980 383 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 JMJD6Q6NYC1 403 aaPredicted RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 MAML2Q8IZL2 1156 aaPredicted RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 ADAD2Q8NCV1 583 aaKnown RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 TERB2Q8NHR7 220 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 PIGQQ9BRB3 760 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 CHST5Q9GZS9 411 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 ZNF160Q9HCG1 818 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 DKKL1Q9UK85 242 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 COL6A3P12111 3177 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 NSG1A0A0A6YYJ2 146 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 A0A0J9YW62 118 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 GJE1A6NN92 205 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 B4E171 279 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 WDPCPO95876 746 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 APOC1P02654 83 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 PMP2P02689 132 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 IFNA6P05013 189 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 TSPAN7P41732 249 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 UBA52P62987 128 aaKnown RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 CHAF1BQ13112 559 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 ZNF528Q3MIS6 628 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 FAM27BQ5VT28 67 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 PEG10Q86TG7 708 aaKnown RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 DTX1Q86Y01 620 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 TMEM185AQ8NFB2 350 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 OR1S1Q8NH92 325 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 ST8SIA4Q92187 359 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 SGCZQ96LD1 299 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 URM1Q9BTM9 101 aaKnown RBP8.28□□□□□ -1.08
PDPN-212ENST00000621990 TM2D1Q9BX74 207 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 OR10A2Q9H208 303 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 HPF1Q9NWY4 346 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 PCDHGA1Q9Y5H4 931 aa8.28□□□□□ -1.08
PDPN-212ENST00000621990 IGHV3-15A0A0B4J1V0 119 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 A0A1W2PP11 408 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 RNF222A6NCQ9 220 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 ZSCAN5BA6NJL1 495 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 DHRS7CA6NNS2 312 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 PATE3B3GLJ2 98 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 CA11O75493 328 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 IGHEP01854 428 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 RLN2P04090 185 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 GP1BAP07359 652 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 FGF2P09038 288 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 CRYGSP22914 178 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 FOLR3P41439 243 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 UBE2V2Q15819 145 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 NSUN5P2Q63ZY6 315 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 OVCH2Q7RTZ1 564 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 LHFPL1Q86WI0 220 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 TMEM156Q8N614 296 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 PPP1R1CQ8WVI7 109 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 ARHGAP5-AS1Q96IT6 56 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 DMRTA2Q96SC8 542 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 SRXN1Q9BYN0 137 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 SLC25A32Q9H2D1 315 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 BANF2Q9H503 90 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 TMA7Q9Y2S6 64 aaKnown RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 OR5H15A6NDH6 313 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 TNFSF11O14788 317 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 SMAD9O15198 467 aaKnown RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 BCL2L11O43521 198 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 CRTAPO75718 401 aaPredicted RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 HPP00738 406 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 SRD5A2P31213 254 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 RAC3P60763 192 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 KRTAP27-1Q3LI81 207 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 TMEM128Q5BJH2 165 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 SLC23A3Q6PIS1 610 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 HSD17B13Q7Z5P4 300 aaPredicted RBP8.27□□□□□ -1.09
PDPN-212ENST00000621990 COQ8AQ8NI60 647 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 ST8SIA2Q92186 375 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 HAS2Q92819 552 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 FBXO17Q96EF6 278 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 C5orf66Q9H5L9 145 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 COMMD9Q9P000 198 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 GPR132Q9UNW8 380 aa8.27□□□□□ -1.09
PDPN-212ENST00000621990 LOC100509620A0A075B734 347 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 TRBV6-7A0A0A0MS04 114 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 A0A0B4J2A0 478 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 CCSO14618 274 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 PDGFBP01127 241 aaPredicted RBP8.26□□□□□ -1.09
PDPN-212ENST00000621990 LIPCP11150 499 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 ATP1B3P54709 279 aa8.26□□□□□ -1.09
PDPN-212ENST00000621990 PPA1Q15181 289 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms