RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
PCDHA11-202ENST00000616325 STMND1H3BQB6 276 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 ARPC3O15145 178 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 XRCC2O43543 280 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 CTLA4P16410 223 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 STARD6P59095 220 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 SLC17A1Q14916 467 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 CDCP2Q5VXM1 449 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 C17orf78Q8N4C9 275 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 OR5D18Q8NGL1 313 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 RNF128Q8TEB7 428 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 RARRES2Q99969 163 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 NICN1Q9BSH3 213 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 EML5Q05BV3 1969 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 IGHV3-20A0A0C4DH32 117 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 ARGFXA6NJG6 315 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 SHISA8B8ZZ34 492 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 TNFSF12O43508 249 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF205O95201 554 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 F10P00742 488 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 HLA-DOBP13765 273 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 CDX1P47902 265 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 GFERP55789 205 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 ASPHD2Q6ICH7 369 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 NMNAT2Q9BZQ4 307 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 SLC5A7Q9GZV3 580 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 CNTD2Q9H8S5 307 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 PLA2G2EQ9NZK7 142 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 GDF2Q9UK05 429 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 RAMP1O60894 148 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 NSA2O95478 260 aaKnown RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 HOXA5P20719 270 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 KIR2DL1P43626 348 aaPredicted RBP11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 EMP2P54851 167 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 TERB2Q8NHR7 220 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 EGLN1Q9GZT9 426 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 NELFAQ9H3P2 528 aa11.93□□□□□ -0.5
PCDHA11-202ENST00000616325 IFITM10A6NMD0 228 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 DIRAS3O95661 229 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 TRGC2P03986 189 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 IL11P20809 199 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 CSRP1P21291 193 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 HAGHQ16775 308 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 C5orf34Q96MH7 638 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 NMES1Q9C002 83 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 PTGES2Q9H7Z7 377 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 UBQLN4Q9NRR5 601 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 MED29Q9NX70 200 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 CCDC163A0A0D9SF12 145 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 A0A1W2PQF6 199 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 TNFP01375 233 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 AMY2BP19961 511 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 SULT1A2P50226 295 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 UBE2KP61086 200 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 RHEBQ15382 184 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 SLC18B1Q6NT16 456 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 GPER1Q99527 375 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 FLVCR1Q9Y5Y0 555 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 A0A087WZY1 265 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 RAB27BO00194 218 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF823P16415 610 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 CARD17Q5XLA6 110 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 ANGPTL5Q86XS5 388 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 EXD3Q8N9H8 876 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 C19orf47Q8N9M1 422 aaKnown RBP11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 TPSD1Q9BZJ3 242 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 C5orf66Q9H5L9 145 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 PARPBPQ9NWS1 579 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 HHLA2Q9UM44 414 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 RFNGQ9Y644 331 aa11.92□□□□□ -0.5
PCDHA11-202ENST00000616325 ABCA7Q8IZY2 2146 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 FREM2Q5SZK8 3169 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 A0A1B0GTQ1 180 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 LOC107986453A0A1B0GWG9 222 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 PRAMEF26H0Y7S4 382 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 PET100P0DJ07 73 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 MYF5P13349 255 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 KLK2P20151 261 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 DCXRQ7Z4W1 244 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 GKN2Q86XP6 184 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
PCDHA11-202ENST00000616325 OTOSQ8NHW6 89 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms