RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 UTS2O95399 124 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 RPL12P30050 165 aaKnown RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 ACY1Q03154 408 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 KIR2DS3Q14952 304 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 TMEM128Q5BJH2 165 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 OR51E1Q8TCB6 317 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 TM4SF19Q96DZ7 209 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 LYRM4Q9HD34 91 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 SLC2A8Q9NY64 477 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 DIDO1Q9BTC0 2240 aaKnown RBP11.71□□□□□ -0.53
MSH6-214ENST00000616033 B4DGG1 531 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 CLDN4O14493 209 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 NXPH3O95157 252 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 ASAH2BP0C7U1 165 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 PNMTP11086 282 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 OMGP23515 440 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 RGS19P49795 217 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 CYCSP99999 105 aaKnown RBP11.71□□□□□ -0.53
MSH6-214ENST00000616033 RPS4Y2Q8TD47 263 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 LRFN5Q96NI6 719 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 CDC6Q99741 560 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 EDEM2Q9BV94 578 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 KCNJ16Q9NPI9 418 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 SOHLH2Q9NX45 425 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
MSH6-214ENST00000616033 CCDC85CA6NKD9 419 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 GIMD1P0DJR0 217 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 ZNF20P17024 532 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 ZNF93P35789 620 aaPredicted RBP11.71□□□□□ -0.54
MSH6-214ENST00000616033 OR1D4P47884 311 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 SULT1A1P50225 295 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 TMEM33P57088 247 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 TAS2R60P59551 318 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 FXYD4P59646 89 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 GUK1Q16774 197 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 GAB4Q2WGN9 574 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.54
MSH6-214ENST00000616033 HIST2H3AQ71DI3 136 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 LRRC75AQ8NAA5 344 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 ASB17Q8WXJ9 295 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 TBL1XR1Q9BZK7 514 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 CACFD1Q9UGQ2 172 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 RAB22AQ9UL26 194 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 VDAC3Q9Y277 283 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 B3GALT1Q9Y5Z6 326 aa11.71□□□□□ -0.54
MSH6-214ENST00000616033 MT-ND4LP03901 98 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 OR3A4PP47883 348 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 RAB38P57729 211 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 GLO1Q04760 184 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 TSPO2Q5TGU0 170 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 PRSS54Q6PEW0 395 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ABHD12BQ7Z5M8 362 aaPredicted RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ZNF700Q9H0M5 742 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 UBQLN4Q9NRR5 601 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 PIAS3Q9Y6X2 628 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 CACNA1DQ01668 2161 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 A6NNC1 897 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ZNF726A6NNF4 738 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 GPR89AB7ZAQ6 455 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 GPR89BP0CG08 455 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 DDTP30046 118 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 RBMXP38159 391 aaKnown RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 RBP2P50120 134 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ZNF141Q15928 474 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 ERGIC1Q969X5 290 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 SH3BGRL3Q9H299 93 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 TMPRSS5Q9H3S3 457 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 THAP10Q9P2Z0 257 aaPredicted RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 SHANK1Q9Y566 2161 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 F8VVB4 439 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 F8VWA3 439 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 AP4M1O00189 453 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 OR2C1O95371 312 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 IL12BP29460 328 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 DVL1P1P54792 670 aaPredicted RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 TLE1Q04724 770 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 CPEB2Q7Z5Q1 589 aaKnown RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
MSH6-214ENST00000616033 SCARF2Q96GP6 870 aaPredicted RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 LMF2Q9BU23 707 aaKnown RBP11.7□□□□□ -0.54
MSH6-214ENST00000616033 IGKV1D-43A0A0B4J1Z2 117 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 UBE2CO00762 179 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 ADAM10O14672 748 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 SLC34A2O95436 690 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms