RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 GATBO75879 557 aaKnown RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 NCR1O76036 304 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 SERPINA3P01011 423 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 CRYAAP02489 173 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 RAF1P04049 648 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 IGFBP3P17936 291 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 FSTP19883 344 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 GALP22466 123 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 PAX7P23759 505 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 SDC2P34741 201 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 SERPINB10P48595 397 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 CAV3P56539 151 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 TIMM50Q3ZCQ8 353 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 OR2T2Q6IF00 324 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 ADAM5Q6NVV9 412 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 CRIP3Q6Q6R5 217 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 FBXW12Q6X9E4 464 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 GDPGP1Q6ZNW5 385 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 MRPL21Q7Z2W9 205 aaKnown RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 LRP11Q86VZ4 500 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 OR5AS1Q8N127 324 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 PARP16Q8N5Y8 322 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 LILRB1Q8NHL6 650 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 KLF14Q8TD94 323 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 UBASH3BQ8TF42 649 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 TMEM171Q8WVE6 324 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 GTF3AQ92664 365 aaKnown RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 AKAP1Q92667 903 aaKnown RBP eCLIP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 TMEM106AQ96A25 262 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 FGGYQ96C11 551 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 CMBLQ96DG6 245 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 PLPPR2Q96GM1 343 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 RADILQ96JH8 1075 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 BCL7BQ9BQE9 202 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 FAM192AQ9GZU8 254 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 RGCCQ9H4X1 137 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 SP140LQ9H930 580 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 MYEF2Q9P2K5 600 aaKnown RBP6.88□□□□□ -1.31
PCDH9-205ENST00000614931 PIGLQ9Y2B2 252 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 CSMD1Q96PZ7 3565 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
PCDH9-205ENST00000614931 IGKV1-9A0A0C4DH69 117 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 CD300LBA8K4G0 201 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF701M0R085 212 aaPredicted RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 SLC22A1O15245 554 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 CDRT1O95170 752 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 THBS4P35443 961 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 RPS19P39019 145 aaKnown RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DDOSTP39656 456 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 MTNR1BP49286 362 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 OR10A3P58181 314 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 MXD1Q05195 221 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 MALLQ13021 153 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 PSG7Q13046 419 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 CNPY1Q3B7I2 92 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 HSD17B12Q53GQ0 312 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 BEX5Q5H9J7 111 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 CEP78Q5JTW2 689 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 TMEM42Q69YG0 159 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF529Q6P280 563 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 VHLLQ6RSH7 139 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 PGAP1Q75T13 922 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 SSX8Q7RTT4 187 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 TGIF2LYQ8IUE0 185 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DNAAF1Q8NEP3 725 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 OR13C9Q8NGT0 318 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 PHYHIPQ92561 330 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DGCR14Q96DF8 476 aaKnown RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 PIK3IP1Q96FE7 263 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 KCTD7Q96MP8 289 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 TMEM204Q9BSN7 226 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 TMUB1Q9BVT8 246 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 BARHL1Q9BZE3 327 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 DCSTAMPQ9H295 470 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 GPR173Q9NS66 373 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 EIF3KQ9UBQ5 218 aaKnown RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF391Q9UJN7 358 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 PURGQ9UJV8 347 aaKnown RBP6.87□□□□□ -1.31
PCDH9-205ENST00000614931 RHBDD3Q9Y3P4 386 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
PCDH9-205ENST00000614931 TRAV1-2A0A0B4J238 106 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 GGT3PA6NGU5 568 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 DHRS7CA6NNS2 312 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 IQCF6A8MYZ5 107 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 E7EQL1 145 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 NOL3O60936 208 aaKnown RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 MAS1P04201 325 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 CD2P06729 351 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 CD99P14209 185 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 RAC2P15153 192 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF250P15622 560 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF20P17024 532 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF182P17025 639 aaPredicted RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 KITLGP21583 273 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms