RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NDUFB7P17568 137 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 GLRA1P23415 457 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 PTAFRP25105 342 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 RAD52P43351 418 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 SLC25A30Q5SVS4 291 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF574Q6ZN55 896 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 C20orf196Q8IYI0 205 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 TMEM105Q8N8V8 129 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 TMEM185AQ8NFB2 350 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 OR4C16Q8NGL9 310 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 KCNK15Q9H427 330 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 SPACA1Q9HBV2 294 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ASF1BQ9NVP2 202 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 NECAP2Q9NVZ3 263 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 DSPPQ9NZW4 1301 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 IGHV1-45A0A0A0MS14 117 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 AQP7P3A6NL99 342 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 WDR1O75083 606 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 NXPH3O95157 252 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ZIC2O95409 532 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 PMS2P2O95744 297 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ASAH2BP0C7U1 165 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 SPNP16150 400 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 NFYAP23511 347 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 CEBPEQ15744 281 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 OR52W1Q6IF63 320 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 OR2M7Q8NG81 312 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 OR51A4Q8NGJ6 313 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 KIRREL1Q96J84 757 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 TSNAXQ99598 290 aaKnown RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 PRRX2Q99811 253 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF275Q9NSD4 429 aaPredicted RBP6.46□□□□□ -1.37
CSDE1-218ENST00000610726 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 NTMQ9P121 344 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 FZR1Q9UM11 496 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 FOXJ3Q9UPW0 622 aa6.46□□□□□ -1.37
CSDE1-218ENST00000610726 MUC6Q6W4X9 2439 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 MEIKINA0A087WXM9 373 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 HSD17B6O14756 317 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 FADS1O60427 444 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 IGKV3-11P04433 115 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 GABRB1P18505 474 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF83P51522 516 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 IRF3Q14653 427 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 OR2A2Q6IF42 318 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 TFAP2EQ6VUC0 442 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 CDC20BQ86Y33 519 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 MFSD4AQ8N468 514 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 UBALD1Q8TB05 177 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 MARCH1Q8TCQ1 289 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 APOBEC4Q8WW27 367 aaKnown RBP6.46□□□□□ -1.38
CSDE1-218ENST00000610726 ABHD1Q96SE0 405 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 TGIF2Q9GZN2 237 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 TAS2R5Q9NYW4 299 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 SIRT4Q9Y6E7 314 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-218ENST00000610726 KIR2DS1A0A191URI9 304 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 OR4C45A6NMZ5 311 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 TO15178 435 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 SSX5O60225 188 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 DHRS3O75911 302 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 S100A9P06702 114 aaKnown RBP6.46□□□□□ -1.38
CSDE1-218ENST00000610726 OR5H8P0DN80 308 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 THBS4P35443 961 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 KIR2DS4P43632 304 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 BTG1P62324 171 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 CATR1Q13166 79 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 GK2Q14410 553 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-218ENST00000610726 KIR2DS1Q14954 304 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 AKR1C8PQ5T2L2 129 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 BRICD5Q6PL45 260 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 OR8B12Q8NGG6 310 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 OR4D6Q8NGJ1 314 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 SLA2Q9H6Q3 261 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 SLC23A1Q9UHI7 598 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 TP53TG5Q9Y2B4 290 aa6.46□□□□□ -1.38
CSDE1-218ENST00000610726 RALGAPA1Q6GYQ0 2036 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 A0A0B4J2A0 478 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 K7EPK0 472 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 MPPED1O15442 326 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 OGG1O15527 345 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 RPS23P62266 143 aaKnown RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 IGLV3-21P80748 117 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 PMP22Q01453 160 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 MFGE8Q08431 387 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 DYRK1AQ13627 763 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 OPCMLQ14982 345 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 LINC00303Q3SY05 128 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF468Q5VIY5 522 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 OSR2Q8N2R0 312 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 FAM71E2Q8N5Q1 922 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 DMBX1Q8NFW5 382 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SGK3Q96BR1 496 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TRMT61AQ96FX7 289 aaKnown RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF436Q9C0F3 470 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TINAGL1Q9GZM7 467 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 GFOD1Q9NXC2 390 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms