RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 OR10A2Q9H208 303 aa19.78■□□□□ 0.76
SHANK2-220ENST00000608988 FAM212BQ9NTI7 297 aaPredicted RBP19.78■□□□□ 0.76
SHANK2-220ENST00000608988 C17orf51A8MQB3 221 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 RAD51DO75771 328 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 SERPINA5P05154 406 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 THEGLP0DJG4 465 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 RBMXP38159 391 aaKnown RBP19.77■□□□□ 0.76
SHANK2-220ENST00000608988 ALDH3B1P43353 468 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 C1orf61Q13536 156 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 THEM4Q5T1C6 240 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 KIAA0895LQ68EN5 471 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 OR10S1Q8NGN2 331 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 OR51E1Q8TCB6 317 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 DDIT4LQ96D03 193 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 TGM7Q96PF1 710 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 CLCC1Q96S66 551 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 IGKV1D-43A0A0B4J1Z2 117 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 DEDDO75618 318 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 ZNF806P0C7X5 589 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 BCKDHBP21953 392 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 CPT2P23786 658 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 GLP1RP43220 463 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 POU3F1Q03052 451 aaPredicted RBP19.77■□□□□ 0.76
SHANK2-220ENST00000608988 TLE3Q04726 772 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 HGFACQ04756 655 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 OR9K2Q8NGE7 335 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 SNIP1Q8TAD8 396 aaKnown RBP19.77■□□□□ 0.76
SHANK2-220ENST00000608988 SSC4DQ8WTU2 575 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 ARHGAP5-AS1Q96IT6 56 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 ALKBH4Q9NXW9 302 aa19.77■□□□□ 0.76
SHANK2-220ENST00000608988 FREM3P0C091 2139 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 ATG2BQ96BY7 2078 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 CDC14CA4D256 554 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 PMS2P1A4D2B8 440 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 RRP8O43159 456 aaKnown RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 ZNF354AO60765 605 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 ZNF44P15621 663 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 S100PP25815 95 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 SUCLG1P53597 346 aaKnown RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 CSNK2A1P68400 391 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 TFF2Q03403 129 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 RBM39Q14498 530 aaKnown RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 DOK3Q7L591 496 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 CSNK2A3Q8NEV1 391 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 FNDC9Q8TBE3 224 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 GSKIPQ9P0R6 139 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 CACNA1CQ13936 2221 aa19.76■□□□□ 0.75
SHANK2-220ENST00000608988 KIAA0100Q14667 2235 aaKnown RBP19.76■□□□□ 0.75
SHANK2-220ENST00000608988 FOXI3A8MTJ6 420 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 SERPINE3A8MV23 424 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 C9JQL5 133 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 IFNA21P01568 189 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 SEC11BP0C7V7 166 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 IL11P20809 199 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 FCGR2CP31995 323 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 OR3A4PP47883 348 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 RTN4RL2Q86UN3 420 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 PNLDC1Q8NA58 520 aaKnown RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 OR2AJ1Q8NGZ0 328 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 AKR1E2Q96JD6 320 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 ARL5BQ96KC2 179 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 PRRX2Q99811 253 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 LRRC61Q9BV99 259 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 OR51M1Q9H341 326 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 RPS10P5Q9NQ39 176 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 GSN-AS1Q9NRJ2 163 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 EHFQ9NZC4 300 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 DHCR7Q9UBM7 475 aaKnown RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 FBXL17Q9UF56 701 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 LINC01387J3KSC0 135 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 ADAM10O14672 748 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 CRTAPO75718 401 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 TSPAN15O95858 294 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 SFTPBP07988 381 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 HCKP08631 526 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 GLRA1P23415 457 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 RAB5CP51148 216 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 SNU13P55769 128 aaKnown RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 RHEBQ15382 184 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 IAH1Q2TAA2 248 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 FBXO46Q6PJ61 603 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 ADPRHL1Q8NDY3 354 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 SLC25A43Q8WUT9 341 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 C5orf34Q96MH7 638 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 MRPL13Q9BYD1 178 aaKnown RBP19.75■□□□□ 0.75
SHANK2-220ENST00000608988 RGCCQ9H4X1 137 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 LHX6Q9UPM6 363 aa19.75■□□□□ 0.75
SHANK2-220ENST00000608988 TCRBV21S2A2A0A5A6 115 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 LINC00587B1AMM8 73 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 GLAP06280 429 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 HOXB5P09067 269 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 GIMD1P0DJR0 217 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 PRF1P14222 555 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 GABRG2P18507 467 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 SNCAP37840 140 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 POLR2GP62487 172 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHANK2-220ENST00000608988 TMEM31Q5JXX7 168 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 C9orf50Q5SZB4 431 aa19.74■□□□□ 0.75
SHANK2-220ENST00000608988 TMEM92Q6UXU6 159 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms