RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-218ENST00000608440 NXPE4Q6UWF7 544 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF66Q6ZN08 573 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 CHST4Q8NCG5 386 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 C2orf50Q96LR7 162 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF2Q9BSG1 426 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-218ENST00000608440 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 TM7SF3Q9NS93 570 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 AHSPQ9NZD4 102 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 NAGKQ9UJ70 344 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 SH3BGRL2Q9UJC5 107 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 YIPF1Q9Y548 306 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 TRDCB7Z8K6 153 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF264O43296 627 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 SMPD2O60906 423 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 IGLV3-27P01718 113 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 UMODP07911 640 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 APOBEC1P41238 236 aaKnown RBP11.19□□□□□ -0.62
CTCFL-218ENST00000608440 KLF3P57682 345 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-218ENST00000608440 FAM220AQ7Z4H9 259 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 P4HA3Q7Z4N8 544 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 GCNT2Q8N0V5 402 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 CSNK1A1LQ8N752 337 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 OR4K15Q8NH41 348 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 STT3BQ8TCJ2 826 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 NUDT11Q96G61 164 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 CMKLR1Q99788 373 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 NMNAT2Q9BZQ4 307 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 SEPSECSQ9HD40 501 aaKnown RBP11.19□□□□□ -0.62
CTCFL-218ENST00000608440 RAB18Q9NP72 206 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 ADAP2Q9NPF8 381 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 VAX2Q9UIW0 290 aa11.19□□□□□ -0.62
CTCFL-218ENST00000608440 CHD7Q9P2D1 2997 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 ANKUB1A6NFN9 424 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 TRAPPC6AO75865 159 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 IRF1P10914 325 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 LMAN2Q12907 356 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 GXYLT1Q4G148 440 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 GLYATL3Q5SZD4 288 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 POC1AQ8NBT0 407 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 MRGPRDQ8TDS7 321 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 ABHD14AQ9BUJ0 271 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 KCNK6Q9Y257 313 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 KLHDC2Q9Y2U9 406 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 PAM16Q9Y3D7 125 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 FEZF1A0PJY2 475 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 C4orf47A7E2U8 309 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 BSGP35613 385 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 DUSP2Q05923 314 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 ARHGAP19Q14CB8 494 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 OR1Q1Q15612 314 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM128Q5BJH2 165 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM240Q5SV17 173 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 OR8G2PQ6IF36 304 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 LINC01555Q8NAE3 123 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 OR2AP1Q8NGE2 309 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 ADAD1Q96M93 576 aaKnown RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 IL17FQ96PD4 163 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 NRTNQ99748 197 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 SLCO5A1Q9H2Y9 848 aa11.18□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF443Q9Y2A4 671 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-218ENST00000608440 DCDC2BA2VCK2 349 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 METTL12A8MUP2 240 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 C1QTNF3-AMACRE9PGA6 284 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 K7EP13 123 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 SLC17A2O00624 439 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-218ENST00000608440 MMDQ15546 238 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 CEBPEQ15744 281 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 PRSS8Q16651 343 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 HAS2Q92819 552 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 TMEM230Q96A57 120 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF514Q96K75 400 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-218ENST00000608440 TSSK2Q96PF2 358 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 MIEN1Q9BRT3 115 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 ZNF700Q9H0M5 742 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 PCED1AQ9H1Q7 454 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 ARV1Q9H2C2 271 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 WFDC1Q9HC57 220 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 MRM2Q9UI43 246 aaKnown RBP11.17□□□□□ -0.62
CTCFL-218ENST00000608440 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 ARID1BQ8NFD5 2236 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-218ENST00000608440 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 A0A1W2PN81 502 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 CLDN34H7C241 214 aa11.17□□□□□ -0.62
CTCFL-218ENST00000608440 UPK3AO75631 287 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms