RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ATP6V1G2-DDX39BF2Z307 99 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 ARFRP1Q13795 201 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 CLEC18BQ6UXF7 455 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 ARRDC1Q8N5I2 433 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 OR56B1Q8NGI3 324 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 OR14K1Q8NGZ2 314 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 MAFIPQ8WZ33 124 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 PIK3IP1Q96FE7 263 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 ST6GALNAC5Q9BVH7 336 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 ASF1BQ9NVP2 202 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 H0YIZ8 118 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 GDF9O60383 454 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 DKK1O94907 266 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 HTR3BO95264 441 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 CTRB1P17538 263 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 PI4KAP42356 2102 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 CTRB2Q6GPI1 263 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 DTX1Q86Y01 620 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 TDHQ8IZJ6 230 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 SSC4DQ8WTU2 575 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 LYZL4Q96KX0 146 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 NMES1Q9C002 83 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 SDCBPO00560 298 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 CELA2AP08217 269 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 AMY2BP19961 511 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 DHPSP49366 369 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 KCNMB1Q16558 191 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 CRIP3Q6Q6R5 217 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 ZSCAN4Q8NAM6 433 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 OR51T1Q8NGJ9 327 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 OR5H2Q8NGV7 314 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 OCSTAMPQ9BR26 566 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 OR10A2Q9H208 303 aa17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 CHCHD2Q9Y6H1 151 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-225ENST00000600733 DNASE2O00115 360 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 TOR1AO14656 332 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 AKR1C2P52895 323 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 SUPT4H1P63272 117 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 AKR1C1Q04828 323 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 KISS1Q15726 138 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 RSPO4Q2I0M5 234 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 SPEM1Q8N4L4 309 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 FADS6Q8N9I5 356 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 PGAM5Q96HS1 289 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 CCDC74BQ96LY2 380 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 URM1Q9BTM9 101 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 UBE2ZQ9H832 354 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 A0A0B4J2A0 478 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 LY6G6EA0A0G2JKS1 128 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 FAM74A7A6NL05 159 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 F5H5K5 113 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 PLATP00750 562 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 GRB2P62993 217 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 FAM74A3Q4VXF1 159 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 ACTBL2Q562R1 376 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 PHYHD1Q5SRE7 291 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 OR13G1Q8NGZ3 307 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 RTBDNQ9BSG5 229 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 FSCN3Q9NQT6 498 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 SHPKQ9UHJ6 478 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 HDGFL3Q9Y3E1 203 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 FLVCR1Q9Y5Y0 555 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 U3KQA8 63 aa17.79■□□□□ 0.44
SHKBP1-225ENST00000600733 ARID1AO14497 2285 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 DMDP11532 3685 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 TRBV6-7A0A0A0MS04 114 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 IGHV3-15A0A0B4J1V0 119 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 TEX13DA0A0J9YY54 714 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 CEACAM18A8MTB9 384 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 SFT2D2O95562 160 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 SLC6A9P48067 706 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 PNLIPRP3Q17RR3 467 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 ANKRD55Q3KP44 614 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 SLC25A43Q8WUT9 341 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 MARC2Q969Z3 335 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 PIGMQ9H3S5 423 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 SDK2Q58EX2 2172 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 MSGN1A6NI15 193 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 PTGFRP43088 359 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 AADACL3Q5VUY0 350 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 PPP1R3BQ86XI6 285 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 LRRC18Q8N456 261 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 ZNF160Q9HCG1 818 aa17.78■□□□□ 0.44
SHKBP1-225ENST00000600733 OR5H15A6NDH6 313 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 F8VVB4 439 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 F8VWA3 439 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 STMND1H3BQB6 276 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 FAHP16930 419 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 SERPINA2P20848 420 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 FPR2P25090 351 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 EIF1P41567 113 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 SNU13P55769 128 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 STARD6P59095 220 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 SLC35A1P78382 337 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 FAM122CQ6P4D5 195 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 GTPBP8Q8N3Z3 284 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 PNLDC1Q8NA58 520 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 STOML3Q8TAV4 291 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 PAQR8Q8TEZ7 354 aa17.77■□□□□ 0.44
SHKBP1-225ENST00000600733 OCIAD1Q9NX40 245 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms