RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SNRPD2P62316 118 aaKnown RBP16.92■□□□□ 0.3
LSM4-203ENST00000593829 ZNF774Q6NX45 483 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 VHLLQ6RSH7 139 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 DTX2Q86UW9 622 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 ZFP41Q8N8Y5 198 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 SPRYD4Q8WW59 207 aaPredicted RBP16.92■□□□□ 0.3
LSM4-203ENST00000593829 RFT1Q96AA3 541 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 GHITMQ9H3K2 345 aa16.92■□□□□ 0.3
LSM4-203ENST00000593829 NCR1O76036 304 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 GYPBP06028 91 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 SPI1P17947 270 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 NKX6-1P78426 367 aaPredicted RBP16.91■□□□□ 0.3
LSM4-203ENST00000593829 SNTB2Q13425 540 aaKnown RBP16.91■□□□□ 0.3
LSM4-203ENST00000593829 CD276Q5ZPR3 534 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 OR51L1Q8NGJ5 315 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 ZNRF4Q8WWF5 429 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 ZNF442Q9H7R0 627 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 DSCAMO60469 2012 aa16.91■□□□□ 0.3
LSM4-203ENST00000593829 A0A0A6YYJ9 748 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 FAM183AA6NL82 134 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 VSTM5A8MXK1 200 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 SGCEO43556 437 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 SLC22A5O76082 557 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 TALDO1P37837 337 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 GDI2P50395 445 aaKnown RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 RAG2P55895 527 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 SHFQ7M4L6 423 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 PAQR4Q8N4S7 273 aaPredicted RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 SPERTQ8NA61 448 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 POM121L2Q96KW2 1035 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 FOXC2Q99958 501 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 MED28Q9H204 178 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 CBLN4Q9NTU7 201 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 MRPL22Q9NWU5 206 aaKnown RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 NUP50Q9UKX7 468 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 LHFPL6Q9Y693 200 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 PRR23D1E9PI22 279 aaPredicted RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 FABP7O15540 132 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 SMPD2O60906 423 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 CD8AP01732 235 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 PRR23D2P0DMB1 279 aaPredicted RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 CLUP10909 449 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 ZNF823P16415 610 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 CCNOP22674 350 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 THBS4P35443 961 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 ART1P52961 327 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 BLVRAP53004 296 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 FCN2Q15485 313 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 TRAM1Q15629 374 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 TPRA1Q86W33 373 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 GJC3Q8NFK1 279 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 OR4M2Q8NGB6 313 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 PTP4A1Q93096 173 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 THAP7Q9BT49 309 aaPredicted RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 HCAR1Q9BXC0 346 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 HDHD2Q9H0R4 259 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 MED20Q9H944 212 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 ZNF275Q9NSD4 429 aaPredicted RBP16.9■□□□□ 0.3
LSM4-203ENST00000593829 PLEK2Q9NYT0 353 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 KCNG2Q9UJ96 466 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 NUBP2Q9Y5Y2 271 aa16.9■□□□□ 0.3
LSM4-203ENST00000593829 LOC100509620A0A075B734 347 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 C5orf49A4QMS7 147 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 SMLR1H3BR10 107 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 DOK2O60496 412 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 OR4A8P0C604 315 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 COX5BP10606 129 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 BTCP35070 178 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 SERPINF1P36955 418 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 MADCAM1Q13477 382 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 PYHIN1Q6K0P9 492 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 PLBD1Q6P4A8 553 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 TEX261Q6UWH6 196 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 GID4Q8IVV7 300 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 OR6K6Q8NGW6 343 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 PLCE1Q9P212 2302 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 CACNG2Q9Y698 323 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 U3KQ87 197 aa16.89■□□□□ 0.29
LSM4-203ENST00000593829 TVP23AA6NH52 213 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 OVOL3O00110 214 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 RER1O15258 196 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 THBS2P35442 1172 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 GLRXP35754 106 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 PITPNBP48739 271 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 RPS23P62266 143 aaKnown RBP16.88■□□□□ 0.29
LSM4-203ENST00000593829 ADIPOQQ15848 244 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 OR8H1Q8NGG4 311 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 OR2AJ1Q8NGZ0 328 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 ZNF431Q8TF32 576 aaPredicted RBP16.88■□□□□ 0.29
LSM4-203ENST00000593829 COPZ2Q9P299 210 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 CYB5R1Q9UHQ9 305 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 ANXA3P12429 323 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 RAD52P43351 418 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 HTR5AP47898 357 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 HIST1H3AP68431 136 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 ADAM8P78325 824 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 RAB35Q15286 201 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 HIST2H3PS2Q5TEC6 136 aa16.88■□□□□ 0.29
LSM4-203ENST00000593829 CORO6Q6QEF8 472 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms