RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GATA4P43694 442 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 RIPPLY3P57055 190 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 BTG1P62324 171 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 ADARB1P78563 741 aaKnown RBP9.67□□□□□ -0.86
VMP1-211ENST00000591315 EGR3Q06889 387 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 POU4F2Q12837 409 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 PRDX4Q13162 271 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 TMED1Q13445 227 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 ZNF829Q3KNS6 432 aaPredicted RBP9.67□□□□□ -0.86
VMP1-211ENST00000591315 BCL2L15Q5TBC7 163 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 FAM166AQ6J272 317 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 LRRC28Q86X40 367 aaPredicted RBP9.67□□□□□ -0.86
VMP1-211ENST00000591315 COMMD2Q86X83 199 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 PRIMA1Q86XR5 153 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 PRSS35Q8N3Z0 413 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 DEFB108BQ8NET1 73 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 CNIH3Q8TBE1 160 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 HPSE2Q8WWQ2 592 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 PIGCQ92535 297 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 MNTQ99583 582 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 OPA3Q9H6K4 179 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 TMEM165Q9HC07 324 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 C1orf123Q9NWV4 160 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 GNG8Q9UK08 70 aa9.67□□□□□ -0.86
VMP1-211ENST00000591315 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.67□□□□□ -0.86
VMP1-211ENST00000591315 EXOGQ9Y2C4 368 aaKnown RBP9.67□□□□□ -0.86
VMP1-211ENST00000591315 A0A0U1RQV5 110 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ACOD1A6NK06 481 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 A6NLC8 198 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 PHYHO14832 338 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 CASQ2O14958 399 aaPredicted RBP9.66□□□□□ -0.86
VMP1-211ENST00000591315 PLPP2O43688 288 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 PTBP3O95758 552 aaKnown RBP9.66□□□□□ -0.86
VMP1-211ENST00000591315 KRT8P05787 483 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 FAHP16930 419 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 DCTDP32321 178 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 KIR3DL2P43630 455 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 OR12D2P58182 307 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ISL1P61371 349 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 IL5RAQ01344 420 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 SLC3A1Q07837 685 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 CR1LQ2VPA4 569 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 CEP78Q5JTW2 689 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ZNF691Q5VV52 312 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 MEDAGQ5VYS4 303 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 SFRP4Q6FHJ7 346 aaPredicted RBP9.66□□□□□ -0.86
VMP1-211ENST00000591315 LYPD2Q6UXB3 125 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 LHFPL3Q86UP9 236 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 CATSPERDQ86XM0 798 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ELMOD2Q8IZ81 293 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 RDH10Q8IZV5 341 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ZNF555Q8NEP9 628 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 OR52I1Q8NGK6 324 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 SEH1LQ96EE3 360 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 ZNF649Q9BS31 505 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 SLC22A4Q9H015 551 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 RGCCQ9H4X1 137 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 KCNS2Q9ULS6 477 aa9.66□□□□□ -0.86
VMP1-211ENST00000591315 FBN1P35555 2871 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 IGHV3OR15-7A0A075B7D8 119 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 DAPL1A0PJW8 107 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 CEACAM18A8MTB9 384 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 B4DSR2 109 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 GPR37O15354 613 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 CST4P01036 141 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 MSMBP08118 114 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 CFL1P23528 166 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 NANOS3P60323 173 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 LCN2P80188 198 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 WDR38Q5JTN6 314 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 FAM120AOSQ5T036 256 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 LAIR2Q6ISS4 152 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 PEG10Q86TG7 708 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 PACRGLQ8N7B6 248 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 CELF2-AS1Q8N7Q2 184 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 CSNK2A3Q8NEV1 391 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 OR1M1Q8NGA1 313 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 OR8S1Q8NH09 359 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 Q8TCH9 128 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 OR5P3Q8WZ94 311 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 RPL3LQ92901 407 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 RDH12Q96NR8 316 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 ISG20L2Q9H9L3 353 aaKnown RBP9.65□□□□□ -0.86
VMP1-211ENST00000591315 FN3KRPQ9HA64 309 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 HIF1ANQ9NWT6 349 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 RNF7Q9UBF6 113 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 PIGLQ9Y2B2 252 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 SNX5Q9Y5X3 404 aa9.65□□□□□ -0.86
VMP1-211ENST00000591315 PPIAL4EA0A075B759 164 aa9.64□□□□□ -0.87
VMP1-211ENST00000591315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.64□□□□□ -0.87
VMP1-211ENST00000591315 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
VMP1-211ENST00000591315 KIAA1324LA8MWY0 1029 aaPredicted RBP9.64□□□□□ -0.87
VMP1-211ENST00000591315 E9PI62 339 aa9.64□□□□□ -0.87
VMP1-211ENST00000591315 F5H0A9 414 aaPredicted RBP9.64□□□□□ -0.87
VMP1-211ENST00000591315 PPIAL4DF5H284 164 aa9.64□□□□□ -0.87
VMP1-211ENST00000591315 J3QLW9 94 aa9.64□□□□□ -0.87
VMP1-211ENST00000591315 CDIPTO14735 213 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms