RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PLBD1Q6P4A8 553 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 Q6YL49 198 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 PDZD9Q8IXQ8 264 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 ADGRG5Q8IZF4 528 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 HS3ST5Q8IZT8 346 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 PNLDC1Q8NA58 520 aaKnown RBP11.86□□□□□ -0.51
VMP1-206ENST00000587945 ST8SIA4Q92187 359 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 LHX4Q969G2 390 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 ASB9Q96DX5 294 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 PGAM5Q96HS1 289 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 PAPOLGQ9BWT3 736 aaKnown RBP11.86□□□□□ -0.51
VMP1-206ENST00000587945 SIRPDQ9H106 197 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 OR10A2Q9H208 303 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 ZNF696Q9H7X3 374 aa11.86□□□□□ -0.51
VMP1-206ENST00000587945 PRPF19Q9UMS4 504 aaKnown RBP11.86□□□□□ -0.51
VMP1-206ENST00000587945 POM121CA8CG34 1229 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.85□□□□□ -0.51
VMP1-206ENST00000587945 ACOT8O14734 319 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 CDIPTO14735 213 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 MELTFP08582 738 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 BPIFB3P59826 476 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 SRSF4Q08170 494 aaKnown RBP11.85□□□□□ -0.51
VMP1-206ENST00000587945 GINS1Q14691 196 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 MICBQ29980 383 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 WDR38Q5JTN6 314 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
VMP1-206ENST00000587945 SHFQ7M4L6 423 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 OR52H1Q8NGJ2 320 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 THEM6Q8WUY1 208 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 CANT1Q8WVQ1 401 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 GATAD2BQ8WXI9 593 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 THTPAQ9BU02 230 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 SP140LQ9H930 580 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 RNPEPL1Q9HAU8 725 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 NOX4Q9NPH5 578 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 PDP1Q9P0J1 537 aaPredicted RBP11.85□□□□□ -0.51
VMP1-206ENST00000587945 KIF17Q9P2E2 1029 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
VMP1-206ENST00000587945 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 GNGT2O14610 69 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 KCNAB3O43448 404 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 APOC1P02654 83 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 AMY2BP19961 511 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 PRKACGP22612 351 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 ACKR3P25106 362 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 GNALP38405 381 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 NAA10P41227 235 aaPredicted RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 RELBQ01201 579 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 BBS1Q8NFJ9 593 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 OTOSQ8NHW6 89 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 RPL3LQ92901 407 aaKnown RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 LYZL4Q96KX0 146 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 FGF23Q9GZV9 251 aaPredicted RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 SNTG1Q9NSN8 517 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 KAAG1Q9UBP8 84 aa11.84□□□□□ -0.51
VMP1-206ENST00000587945 RPUSD1Q9UJJ7 312 aaKnown RBP11.84□□□□□ -0.51
VMP1-206ENST00000587945 ARRDC5A6NEK1 342 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
VMP1-206ENST00000587945 FAM107AO95990 144 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 TFF1P04155 84 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 CRYBA1P05813 215 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 LYNP07948 512 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 SELLP14151 372 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 MUC1P15941 1255 aaPredicted RBP11.83□□□□□ -0.52
VMP1-206ENST00000587945 CFL1P23528 166 aaKnown RBP11.83□□□□□ -0.52
VMP1-206ENST00000587945 HCCSP53701 268 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 RAG2P55895 527 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 PRDX4Q13162 271 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 IKZF1Q13422 519 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 PDCD1Q15116 288 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 TMEM236Q5W0B7 351 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.83□□□□□ -0.52
VMP1-206ENST00000587945 CPOQ8IVL8 374 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 GALNT4Q8N4A0 578 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 CSNK2A3Q8NEV1 391 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 FAM71F1Q96KD3 344 aaPredicted RBP11.83□□□□□ -0.52
VMP1-206ENST00000587945 SLITRK2Q9H156 845 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 WDR13Q9H1Z4 485 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 C1RLQ9NZP8 487 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 ONECUT1Q9UBC0 465 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
VMP1-206ENST00000587945 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
VMP1-206ENST00000587945 ANXA2P2A6NMY6 339 aa11.82□□□□□ -0.52
VMP1-206ENST00000587945 E2F6O75461 281 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms