RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.17■□□□□ 0.342e-7■■□□□ 11.4
LDLRAD4-212ENST00000587905 IL17RELQ6ZVW7 336 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 FAM220AQ7Z4H9 259 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 C1orf87Q8N0U7 546 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 KLHL36Q8N4N3 616 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 SPICQ8N5J4 248 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 PACRGLQ8N7B6 248 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 C19orf18Q8NEA5 215 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 POM121Q96HA1 1249 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 G6PC2Q9NQR9 355 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 C8orf4Q9NR00 106 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 C1orf123Q9NWV4 160 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 SLC22A13Q9Y226 551 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 SNX5Q9Y5X3 404 aa17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 SONP18583 2426 aaKnown RBP17.17■□□□□ 0.34
LDLRAD4-212ENST00000587905 NIPBLQ6KC79 2804 aaeCLIP17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 hCG_1807616A0A1W2PRN6 198 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 ANXA2P2A6NMY6 339 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 MSMBP08118 114 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 PSMB10P40306 273 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 MDH2P40926 338 aaKnown RBP17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 HOXA4Q00056 320 aaPredicted RBP17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 ZNF181Q2M3W8 571 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 ZNF826PQ6ZT77 177 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 THAP5Q7Z6K1 395 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 GLCCI1Q86VQ1 547 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 OR51F2Q8NH61 342 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 ERGIC1Q969X5 290 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 LGALS12Q96DT0 336 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 C1orf159Q96HA4 380 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 NF1P21359 2839 aa17.16■□□□□ 0.34
LDLRAD4-212ENST00000587905 H3BSH0 61 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 P2RY10O00398 339 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 SULT1C4O75897 302 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 CHRFAM7AQ494W8 412 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 ZNF684Q5T5D7 378 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 OGFRL1Q5TC84 451 aaPredicted RBP17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 KCTD8Q6ZWB6 473 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 WDR86Q86TI4 376 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 LRRC28Q86X40 367 aaPredicted RBP17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 ELMOD2Q8IZ81 293 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 DHRSXQ8N5I4 330 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 SEMA6DQ8NFY4 1073 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 Q8TCH9 128 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 APH1BQ8WW43 257 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 RORBQ92753 470 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 MICU1Q9BPX6 476 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 SHARPINQ9H0F6 387 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 ACOXLQ9NUZ1 547 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 RNF7Q9UBF6 113 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 NKX1-2Q9UD57 310 aaPredicted RBP17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 PIGLQ9Y2B2 252 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 PCDHGB1Q9Y5G3 927 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 MPC1Q9Y5U8 109 aa17.15■□□□□ 0.34
LDLRAD4-212ENST00000587905 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ZNF816-ZNF321PA0A0X1KG74 233 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 CASQ2O14958 399 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 CST4P01036 141 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 FAHP16930 419 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 DVL1P1P54792 670 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 CSNK2BP67870 215 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 SMN1Q16637 294 aaKnown RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 CR1LQ2VPA4 569 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 TMEM155Q4W5P6 130 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 DMRTC1Q5HYR2 192 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 FAM120AOSQ5T036 256 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ZNF691Q5VV52 312 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 TTC23Q5W5X9 447 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ZDHHC23Q8IYP9 409 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 MUC20Q8N307 709 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ACBD7Q8N6N7 88 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 DEFB108BQ8NET1 73 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 TMEM186Q96B77 213 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ITPKCQ96DU7 683 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 RTL8AQ9BWD3 113 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 BEX2Q9BXY8 128 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 HIF1ANQ9NWT6 349 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 EXOGQ9Y2C4 368 aaKnown RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ANK3Q12955 4377 aaKnown RBP17.14■□□□□ 0.33
LDLRAD4-212ENST00000587905 ZFHX3Q15911 3703 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 J3QRE1 110 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 PLPP2O43688 288 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 MTRF1O75570 445 aaKnown RBP17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 DHRS3O75911 302 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 PTBP3O95758 552 aaKnown RBP17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 IGLV3-1P01715 115 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 RPS2P15880 293 aaKnown RBP17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 CD80P33681 288 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 LCN2P80188 198 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 RIPPLY1Q0D2K3 151 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 CEP78Q5JTW2 689 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 SFRP4Q6FHJ7 346 aaPredicted RBP17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 CATSPERDQ86XM0 798 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 PLPP7Q8NBV4 271 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 OR1M1Q8NGA1 313 aa17.13■□□□□ 0.33
LDLRAD4-212ENST00000587905 CNIH3Q8TBE1 160 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms