RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KISS1Q15726 138 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 GABRG1Q8N1C3 465 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 TOMM5Q8N4H5 51 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 PNLDC1Q8NA58 520 aaKnown RBP17.2■□□□□ 0.34
TRIM47-204ENST00000587339 MRPS28Q9Y2Q9 187 aaKnown RBP17.2■□□□□ 0.34
TRIM47-204ENST00000587339 GTF3C1Q12789 2109 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 CGAP01215 116 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 RAB6AP20340 208 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 OR3A4PP47883 348 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 MALLQ13021 153 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 C3P1Q6ZMU1 363 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 ZNF101Q8IZC7 436 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 RPRMLQ8N4K4 120 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 ZNF610Q8N9Z0 462 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 SLC30A7Q8NEW0 376 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 FCAMRQ8WWV6 532 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 ZNF75AQ96N20 296 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 NEDD4LQ96PU5 975 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 GAL3ST1Q99999 423 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 RBFOX1Q9NWB1 397 aaKnown RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 RAB22AQ9UL26 194 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 IGF2RP11717 2491 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 A0A1W2PR80 420 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 GMDSO60547 372 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 HOXD4P09016 255 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 VSIG8P0DPA2 414 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 HOXB1P14653 301 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 HOXC12P31275 282 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 TIMP3P35625 211 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 PMPCAQ10713 525 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 TSC22D1Q15714 1073 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 GLIPR1L1Q6UWM5 242 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 C1orf162Q8NEQ5 155 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 ENKURQ8TC29 256 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 OPN3Q9H1Y3 402 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-204ENST00000587339 GPR173Q9NS66 373 aa17.19■□□□□ 0.34
TRIM47-204ENST00000587339 TRAV18A0A075B6X5 111 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 METTL21EPA6NDL7 271 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 PTHLHP12272 177 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 BCAP31P51572 246 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 QRFPP83859 136 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 GK2Q14410 553 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-204ENST00000587339 CNN3Q15417 329 aaKnown RBP17.18■□□□□ 0.34
TRIM47-204ENST00000587339 LINC00303Q3SY05 128 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 CLVS2Q5SYC1 327 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 PAQR4Q8N4S7 273 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-204ENST00000587339 NAXEQ8NCW5 288 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 OR52I2Q8NH67 350 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 PIGTQ969N2 578 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 ITFG2Q969R8 447 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 FAM46BQ96A09 425 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 SPSB1Q96BD6 273 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 TUBD1Q9UJT1 453 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 PIEZO2Q9H5I5 2752 aa17.18■□□□□ 0.34
TRIM47-204ENST00000587339 ORC5O43913 435 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 NRASP01111 189 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 NGFP01138 241 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 ZNF14P17017 642 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-204ENST00000587339 GDNFP39905 211 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 UNC119Q13432 240 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 TBC1D28Q2M2D7 210 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 BEND4Q6ZU67 534 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 SNRNP40Q96DI7 357 aaKnown RBP17.17■□□□□ 0.34
TRIM47-204ENST00000587339 BOD1Q96IK1 185 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 SLX1AQ9BQ83 275 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 REPIN1Q9BWE0 567 aaKnown RBP17.17■□□□□ 0.34
TRIM47-204ENST00000587339 NEK6Q9HC98 313 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 PIEZO1Q92508 2521 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 BSNQ9UPA5 3926 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 A0A0A6YYH2 397 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 ZNF816-ZNF321PA0A0X1KG74 233 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 A6NJ64 397 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 C1QTNF9BB2RNN3 333 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 PRRG2O14669 202 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 C1QTNF9P0C862 333 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 PTGFRP43088 359 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 KIR2DL3P43628 341 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 P2RY6Q15077 328 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 TMEM42Q69YG0 159 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 MRPL21Q7Z2W9 205 aaKnown RBP17.17■□□□□ 0.34
TRIM47-204ENST00000587339 OR5D18Q8NGL1 313 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 FBLN5Q9UBX5 448 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 STARD10Q9Y365 291 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 CACNG2Q9Y698 323 aa17.17■□□□□ 0.34
TRIM47-204ENST00000587339 FAM240BA0A1B0GVZ2 78 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 UBBP0CG47 229 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 PRKACBP22694 351 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 CRIP3Q6Q6R5 217 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 GFRALQ6UXV0 394 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 CXorf67Q86X51 503 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-204ENST00000587339 CELF2-AS1Q8N7Q2 184 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 ZC3HAV1LQ96H79 300 aaKnown RBP17.16■□□□□ 0.34
TRIM47-204ENST00000587339 C1orf147Q96MC9 270 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-204ENST00000587339 TP63Q9H3D4 680 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-204ENST00000587339 KLK11Q9UBX7 282 aa17.16■□□□□ 0.34
TRIM47-204ENST00000587339 CENPXA8MT69 81 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 TMEM14DPA8MWL7 114 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 WNT5AP41221 380 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 IDH3GP51553 393 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms