RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SPICQ8N5J4 248 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 CSNK2A3Q8NEV1 391 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 OR2T27Q8NH04 317 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 APH1BQ8WW43 257 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 ERGIC1Q969X5 290 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 TMEM246Q9BRR3 403 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 METTL17Q9H7H0 456 aaPredicted RBP16.85■□□□□ 0.29
SS18-218ENST00000581021 FN3KRPQ9HA64 309 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 C1orf123Q9NWV4 160 aa16.85■□□□□ 0.29
SS18-218ENST00000581021 FBN1P35555 2871 aaKnown RBP16.84■□□□□ 0.29
SS18-218ENST00000581021 TRAV20A0A0B4J274 112 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 LOC100130705A0A1B0GUX0 176 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 LRRC30A6NM36 301 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 ZNF850A8MQ14 1090 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 C3orf80F5H4A9 247 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 LOC110117498-PIK3R3F6TDL0 507 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 RPP14O95059 124 aaKnown RBP16.84■□□□□ 0.29
SS18-218ENST00000581021 CST4P01036 141 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 AVPP01185 164 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 EGR1P18146 543 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 CD80P33681 288 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 THBS2P35442 1172 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 ISL1P61371 349 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 ZNF154Q13106 437 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 PRDX4Q13162 271 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 ZNF404Q494X3 552 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 KRT74Q7RTS7 529 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 GALNT4Q8N4A0 578 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 SPERTQ8NA61 448 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 PLPP7Q8NBV4 271 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 OR8S1Q8NH09 359 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 RHOXF1Q8NHV9 184 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 FAM71F1Q96KD3 344 aaPredicted RBP16.84■□□□□ 0.29
SS18-218ENST00000581021 SMPD3Q9NY59 655 aaPredicted RBP16.84■□□□□ 0.29
SS18-218ENST00000581021 LPAR3Q9UBY5 353 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 ZNF391Q9UJN7 358 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.84■□□□□ 0.29
SS18-218ENST00000581021 SLC22A13Q9Y226 551 aa16.84■□□□□ 0.29
SS18-218ENST00000581021 PPIAL4EA0A075B759 164 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.83■□□□□ 0.28
SS18-218ENST00000581021 A0A1B0GTI1 187 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 PPIAL4DF5H284 164 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 SLC16A6O15403 523 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 PPIAL4FP0DN26 164 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 ZNF91Q05481 1191 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 GABPB1Q06547 395 aaPredicted RBP16.83■□□□□ 0.28
SS18-218ENST00000581021 TP53I3Q53FA7 332 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 DMRTC1Q5HYR2 192 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 BCL2L15Q5TBC7 163 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 LIPNQ5VXI9 398 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 MEDAGQ5VYS4 303 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 LYPD2Q6UXB3 125 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 ELMOD2Q8IZ81 293 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 KLHL36Q8N4N3 616 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 GCSAMQ8N6F7 178 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 YIPF7Q8N8F6 280 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 OR1M1Q8NGA1 313 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 OR11L1Q8NGX0 322 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 OR5P3Q8WZ94 311 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 RORBQ92753 470 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 LGALS12Q96DT0 336 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 ACOXLQ9NUZ1 547 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 RNF7Q9UBF6 113 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 OR52A1Q9UKL2 312 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 GTF2A1LQ9UNN4 478 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 PPIAL4AQ9Y536 164 aa16.83■□□□□ 0.28
SS18-218ENST00000581021 METTL15A6NJ78 407 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 A6NLC8 198 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 PHF1O43189 567 aaPredicted RBP16.82■□□□□ 0.28
SS18-218ENST00000581021 FSTL3O95633 263 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 CLIC3O95833 236 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 KRT8P05787 483 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 WNT2P09544 360 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 FAHP16930 419 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 ATP6V1E1P36543 226 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 GNALP38405 381 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 COMMD2Q86X83 199 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 CATSPERDQ86XM0 798 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 C1orf87Q8N0U7 546 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 MUC20Q8N307 709 aaPredicted RBP16.82■□□□□ 0.28
SS18-218ENST00000581021 BOLLQ8N9W6 283 aaKnown RBP16.82■□□□□ 0.28
SS18-218ENST00000581021 DEFB108BQ8NET1 73 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 PIGCQ92535 297 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 TMPRSS13Q9BYE2 586 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 TLNRD1Q9H1K6 362 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 MOB1AQ9H8S9 216 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 AMBNQ9NP70 447 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 MMP26Q9NRE1 261 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 C14orf119Q9NWQ9 140 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 PCDHB10Q9UN67 800 aa16.82■□□□□ 0.28
SS18-218ENST00000581021 A8MXK9 166 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 TRAPPC2LH3BP13 241 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.81■□□□□ 0.28
SS18-218ENST00000581021 P2RY10O00398 339 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 WBP4O75554 376 aaKnown RBP16.81■□□□□ 0.28
SS18-218ENST00000581021 LHBP01229 141 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 DBTP11182 482 aaKnown RBP16.81■□□□□ 0.28
SS18-218ENST00000581021 IRF2P14316 349 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 SRD5A1P18405 259 aa16.81■□□□□ 0.28
SS18-218ENST00000581021 SFRP4Q6FHJ7 346 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms