RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 GIPC3Q8TF64 312 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 THEM6Q8WUY1 208 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RNF133Q8WVZ7 376 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SPSB4Q96A44 273 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SGK3Q96BR1 496 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SEH1LQ96EE3 360 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CLPTM1LQ96KA5 538 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 AMELYQ99218 206 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FEVQ99581 238 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CCL13Q99616 98 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CHIAQ9BZP6 476 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PPP1R3EQ9H7J1 279 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZNF696Q9H7X3 374 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NOX4Q9NPH5 578 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ACOXLQ9NUZ1 547 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TAS2R1Q9NYW7 299 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DNAJB11Q9UBS4 358 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4Q9UBX2 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRPF19Q9UMS4 504 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 hCG_38984A0A1B0GV85 526 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ANXA2P2A6NMY6 339 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRR23D1E9PI22 279 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CDIPTO14735 213 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SELENOFO60613 162 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 E2F6O75461 281 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GLCEO94923 617 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 KNG1P01042 644 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MELTFP08582 738 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRR23D2P0DMB1 279 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MMP9P14780 707 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CFL1P23528 166 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GSK3AP49840 483 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RAG2P55895 527 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RPS7P62081 194 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRB3Q04118 309 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PDCD1Q15116 288 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 WDR38Q5JTN6 314 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TEX36Q5VZQ5 186 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PLBD1Q6P4A8 553 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 WDR82Q6UXN9 313 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SLC36A1Q7Z2H8 476 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 VMO1Q7Z5L0 202 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FTMTQ8N4E7 242 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM216BQ8N7L0 139 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OR52H1Q8NGJ2 320 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OR4F5Q8NH21 305 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 H1FXQ92522 213 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ASB9Q96DX5 294 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM71F1Q96KD3 344 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CCT8L2Q96SF2 557 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MICU1Q9BPX6 476 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RTL8AQ9BWD3 113 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CHID1Q9BWS9 393 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CNTD2Q9H8S5 307 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZNF556Q9HAH1 456 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RNPEPL1Q9HAU8 725 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 BEX1Q9HBH7 125 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SNTG1Q9NSN8 517 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PDP1Q9P0J1 537 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZNF319Q9P2F9 582 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RHBDD3Q9Y3P4 386 aa7.62□□□□□ -1.19
CDK5RAP3-211ENST00000578996 IGHV1-69DA0A0B4J2H0 117 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 A0A0U1RQK1 487 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZNF850A8MQ14 1090 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ACOT8O14734 319 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TNFRSF13BO14836 293 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 KCNAB3O43448 404 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NDUFB3O43676 98 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FCN3O75636 299 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TIPRLO75663 272 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ECDO95905 644 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LHBP01229 141 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 IGHV1-69P01742 117 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MUC1P15941 1255 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OPRL1P41146 370 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 IL5RAQ01344 420 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SRSF4Q08170 494 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRDX4Q13162 271 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GINS1Q14691 196 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SNCBQ16143 134 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CDONQ4KMG0 1287 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 BRICD5Q6PL45 260 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 COMMD2Q86X83 199 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 C11orf53Q8IXP5 236 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TIGD4Q8IY51 512 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CCDC197Q8NCU1 140 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CSNK2A3Q8NEV1 391 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OR5T2Q8NGG2 359 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM81AQ8TBF8 368 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TBC1D15Q8TC07 691 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CANT1Q8WVQ1 401 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SSMEM1Q8WWF3 244 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PIGCQ92535 297 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RPL3LQ92901 407 aaKnown RBP7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 THTPAQ9BU02 230 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SIRT7Q9NRC8 400 aa7.61□□□□□ -1.19
CDK5RAP3-211ENST00000578996 C1RLQ9NZP8 487 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms