RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SLITRK2Q9H156 845 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 CRIM1Q9NZV1 1036 aa20.64■□□□□ 0.9
ATPAF1-213ENST00000574428 ANKHD1Q8IWZ3 2542 aaKnown RBP20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 CD300LBA8K4G0 201 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 ADRA2CP18825 462 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 THBS4P35443 961 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 DMRTC1Q5HYR2 192 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 TMEM255AQ5JRV8 349 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 LRRTM1Q86UE6 522 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 CROCCP3Q8IVE0 287 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 OR5D14Q8NGL3 314 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 OCEL1Q9H607 264 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 PPP1R3EQ9H7J1 279 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 FOXJ3Q9UPW0 622 aa20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 AK6Q9Y3D8 172 aaKnown RBP20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 USP9XQ93008 2570 aaPredicted RBP20.64■□□□□ 0.89
ATPAF1-213ENST00000574428 CADP27708 2225 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 SIAH2O43255 324 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 PLA2G2AP14555 144 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 DDOSTP39656 456 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 KIR2DL3P43628 341 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 FABP6P51161 128 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 MSMPQ1L6U9 139 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 DNAAF1Q8NEP3 725 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 C10orf35Q96D05 121 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 ZCCHC4Q9H5U6 513 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 RHBDD3Q9Y3P4 386 aa20.63■□□□□ 0.89
ATPAF1-213ENST00000574428 LILRA1O75019 489 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 RAC2P15153 192 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 PPP3R1P63098 170 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 PSG7Q13046 419 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 CEP78Q5JTW2 689 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 RGS7BPQ6MZT1 257 aaPredicted RBP20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 C1orf174Q8IYL3 243 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 OR5AS1Q8N127 324 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 GFI1Q99684 422 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 CHST5Q9GZS9 411 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 ZNF816-ZNF321PA0A0X1KG74 233 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 RAB3BP20337 219 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 TUBG1P23258 451 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 GLRXP35754 106 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 HNRNPA0Q13151 305 aaKnown RBP20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 ALKBH6Q3KRA9 238 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 ZNF718Q3SXZ3 478 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 BEX5Q5H9J7 111 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 TPRA1Q86W33 373 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 OR1M1Q8NGA1 313 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 TMEM171Q8WVE6 324 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 PP6455Q8WZ26 134 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 SLC25A46Q96AG3 418 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 HAVCR1Q96D42 359 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 TUBG2Q9NRH3 451 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 GPR173Q9NS66 373 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 ATP23Q9Y6H3 246 aa20.62■□□□□ 0.89
ATPAF1-213ENST00000574428 RAB3AP20336 220 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 RORCP51449 518 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 UBE2V2Q15819 145 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 ZNF529Q6P280 563 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 DMRTC2Q8IXT2 367 aaPredicted RBP20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 NUP37Q8NFH4 326 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 PAPOLGQ9BWT3 736 aaKnown RBP20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 POU2F3Q9UKI9 436 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 DOPEY1Q5JWR5 2465 aa20.61■□□□□ 0.89
ATPAF1-213ENST00000574428 IGKV1-9A0A0C4DH69 117 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 A0A1B0GVG6 124 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 DEFB108AA8MXU0 73 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 SULT1B1O43704 296 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 GMDSO60547 372 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 CD3EP07766 207 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 IGFBP2P18065 325 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 GCH1P30793 250 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 CLVS2Q5SYC1 327 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 MBNL2Q5VZF2 373 aaKnown RBP20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 TMEM42Q69YG0 159 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 CSNK2A3Q8NEV1 391 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 UBASH3BQ8TF42 649 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 NPRL2Q8WTW4 380 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 PIGCQ92535 297 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 NKX3-1Q99801 234 aaPredicted RBP20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 PALMDQ9NP74 551 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 GPR160Q9UJ42 338 aa20.6■□□□□ 0.89
ATPAF1-213ENST00000574428 A0A075B6Q4 140 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 A0A0G2JK05 382 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 ANXA2P2A6NMY6 339 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 SHISA9B4DS77 424 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 PDCD5O14737 125 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 RPS23P62266 143 aaKnown RBP20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 ZBTB37Q5TC79 503 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 C16orf87Q6PH81 154 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 UTS2BQ765I0 119 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 LRP11Q86VZ4 500 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 PIK3IP1Q96FE7 263 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 HS3ST6Q96QI5 342 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 CA10Q9NS85 328 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 KCNN3Q9UGI6 736 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 ZNF850A8MQ14 1090 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 NRASP01111 189 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 BDKRB2P30411 391 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 SSC4DQ8WTU2 575 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 SMURF1Q9HCE7 757 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms