RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 H3BSA7 217 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 SLC1A7O00341 560 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 P2RY10O00398 339 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 LILRA1O75019 489 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 SULT1C4O75897 302 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 SELEP16581 610 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 DCKP27707 260 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 DCTDP32321 178 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 MMP15P51511 669 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 ACTA2P62736 377 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 ACTG2P63267 376 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 CCL8P80075 99 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 MED21Q13503 144 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 CDONQ4KMG0 1287 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 PRR31Q5SQ13 230 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 OR2G6Q5TZ20 316 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 Q6ZR03 302 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 GLCCI1Q86VQ1 547 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 OR8G5Q8NG78 346 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 OR56B2PQ8NGI1 322 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 OR51E1Q8TCB6 317 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 RORBQ92753 470 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 G6PC2Q9NQR9 355 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 ERVK-18Q9QC07 812 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 EXOSC1Q9Y3B2 195 aaKnown RBP11.28□□□□□ -0.6
CCDC40-205ENST00000571028 SNX5Q9Y5X3 404 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 IQCF6A8MYZ5 107 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 LYNX1G3V0Z9 82 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 H0YL77 283 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 CDC14BO60729 498 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 SRSF10O75494 262 aaKnown RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 IGHV1-46P01743 117 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TTRP02766 147 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 HTR1AP08908 422 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 LYNX1P0DP58 116 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 CA6P23280 308 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 IL2RGP31785 369 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 GSK3AP49840 483 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 MMP16P51512 607 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 GBX2P52951 348 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 DVL1P1P54792 670 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 CDH15P55291 814 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 FAM3AP98173 230 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 WDR38Q5JTN6 314 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TMPRSS11AQ6ZMR5 421 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 KCTD20Q7Z5Y7 419 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 PEG10Q86TG7 708 aaKnown RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 KLHL36Q8N4N3 616 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 SGCDQ92629 289 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 DVL3Q92997 716 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 PELI1Q96FA3 418 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 ELMOD3Q96FG2 381 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 MYCBPQ99417 103 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 CCDC90BQ9GZT6 254 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 CYSLTR2Q9NS75 346 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 NUFIP1Q9UHK0 495 aaKnown RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 FBXO9Q9UK97 447 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 PCDHB10Q9UN67 800 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TPRKBQ9Y3C4 175 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 TGP01266 2768 aa11.27□□□□□ -0.61
CCDC40-205ENST00000571028 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 E9PI62 339 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 HPXP02790 462 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 DAOP14920 347 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 C21orf33P30042 268 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 RBMXP38159 391 aaKnown RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 LIPAP38571 399 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 CSNK2BP67870 215 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 OR8G1Q15617 311 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 ZMAT1Q5H9K5 638 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 KLBQ86Z14 1044 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 ELMOD2Q8IZ81 293 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 RDH10Q8IZV5 341 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-205ENST00000571028 GATAD2BQ8WXI9 593 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 PIGCQ92535 297 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 MYDGFQ969H8 173 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF649Q9BS31 505 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms