RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ERVS71-1P61550 626 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 SMN1Q16637 294 aaKnown RBP7.99□□□□□ -1.13
CAPN3-216ENST00000567071 TBC1D28Q2M2D7 210 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF718Q3SXZ3 478 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 ARMC4Q5T2S8 1044 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 METTL11BQ5VVY1 283 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 GPR139Q6DWJ6 353 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF774Q6NX45 483 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 PLBD1Q6P4A8 553 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 CPOQ8IVL8 374 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF283Q8N7M2 679 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 BBS1Q8NFJ9 593 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 OR8J1Q8NGP2 316 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 OR9Q1Q8NGQ5 310 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 OR1J2Q8NGS2 313 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 TMEM163Q8TC26 289 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 HDAC2Q92769 488 aaKnown RBP7.99□□□□□ -1.13
CAPN3-216ENST00000567071 DACT3Q96B18 629 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-216ENST00000567071 ASCL2Q99929 193 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 HCAR1Q9BXC0 346 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 RERGLQ9H628 205 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 RANBP3Q9H6Z4 567 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-216ENST00000567071 DCAF16Q9NXF7 216 aa7.99□□□□□ -1.13
CAPN3-216ENST00000567071 LOC102725191A0A1B0GVB3 256 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 OR6C68A6NDL8 312 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 A6NIZ1 184 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NPIPB13A6NJU9 1138 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF726A6NNF4 738 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF879B4DU55 563 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NPIPB4C9JG80 1138 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PRR23D1E9PI22 279 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 M0R3G1 203 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 MPZL2O60487 215 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 FAM20BO75063 409 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 ENTPD6O75354 484 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PEX14O75381 377 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RENP00797 406 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 GYPBP06028 91 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 LIPFP07098 398 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 CD55P08174 381 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PRR23D2P0DMB1 279 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 CD28P10747 220 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 CLUP10909 449 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PAICSP22234 425 aaKnown RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PYCR1P32322 319 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RAP1BP61224 184 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 SNRPGP62308 76 aaKnown RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RAP1AP62834 184 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 FMODQ06828 376 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 KLHL12Q53G59 568 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NKAPLQ5M9Q1 402 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 LAIR2Q6ISS4 152 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 UNQ9370/PRO34162Q6UXP9 181 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 UNQ6126/PRO20091Q6UXV3 157 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NHLRC1Q6VVB1 395 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 ADCK1Q86TW2 530 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NPEPL1Q8NDH3 523 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 NOXO1Q8NFA2 376 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 OR51L1Q8NGJ5 315 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 OR1J1Q8NGS3 322 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RHOXF1Q8NHV9 184 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 LHX4Q969G2 390 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 LRR1Q96L50 414 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RCHY1Q96PM5 261 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 CITED2Q99967 270 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 SYT4Q9H2B2 425 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RAB18Q9NP72 206 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 RPRD1BQ9NQG5 326 aaKnown RBP7.98□□□□□ -1.13
CAPN3-216ENST00000567071 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PPP1R3CQ9UQK1 317 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 HSPE1-MOB4S4R3N1 261 aa7.98□□□□□ -1.13
CAPN3-216ENST00000567071 PRSS37A4D1T9 235 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 ZSCAN5BA6NJL1 495 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 IFNL4K9M1U5 179 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 SLC1A7O00341 560 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 PHYHO14832 338 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 TRMUO75648 421 aaKnown RBP7.97□□□□□ -1.13
CAPN3-216ENST00000567071 APOL3O95236 402 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 PAHP00439 452 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 IGHG1P01857 330 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 CHRM2P08172 466 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 PGA4P0DJD7 388 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 PGA3P0DJD8 388 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 B4GALT1P15291 398 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 CSNK1A1P48729 337 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 MMP15P51511 669 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 CLRN1P58418 232 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 RPS7P62081 194 aaKnown RBP7.97□□□□□ -1.13
CAPN3-216ENST00000567071 EFNB1P98172 346 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 APOFQ13790 326 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 CD276Q5ZPR3 534 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 HDDC2Q7Z4H3 204 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 BPIFB6Q8NFQ5 453 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 OR6X1Q8NH79 312 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 FBLIM1Q8WUP2 373 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 TRUB1Q8WWH5 349 aaKnown RBP7.97□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF566Q969W8 418 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 SLC25A44Q96H78 314 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-216ENST00000567071 ZNF582Q96NG8 517 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-216ENST00000567071 WDFY2Q96P53 400 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms