RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 RETP07949 1114 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 GKN3PP0CG01 181 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 NQO2P16083 231 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 CCNE1P24864 410 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 HOXA9P31269 272 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 HTR2BP41595 481 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 RPS9P46781 194 aaKnown RBP4.3□□□□□ -1.72
KARS-208ENST00000566772 CXCL12P48061 93 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 DIO3P55073 304 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 RPS21P63220 83 aaKnown RBP4.3□□□□□ -1.72
KARS-208ENST00000566772 REG3AQ06141 175 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 KIAA0087Q14695 138 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 PSG3Q16557 428 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ZBED5Q49AG3 693 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 FAM78AQ5JUQ0 283 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 CCNJQ5T5M9 372 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 TPTE2P1Q5T6R2 138 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ADAM5Q6NVV9 412 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 TMPRSS11AQ6ZMR5 421 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 CD302Q8IX05 232 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 MREGQ8N565 214 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 OR8D1Q8WZ84 308 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ELSPBP1Q96BH3 223 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 TCEAL4Q96EI5 215 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 MBOAT7Q96N66 472 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 TRNT1Q96Q11 434 aaKnown RBP4.3□□□□□ -1.72
KARS-208ENST00000566772 UTP23Q9BRU9 249 aaKnown RBP4.3□□□□□ -1.72
KARS-208ENST00000566772 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 OR52A5Q9H2C5 316 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 GOLPH3Q9H4A6 298 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ARMC7Q9H6L4 198 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 SH2D2AQ9NP31 389 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 XPNPEP1Q9NQW7 623 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 SLC17A7Q9P2U7 560 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ZNF282Q9UDV7 671 aaPredicted RBP4.3□□□□□ -1.72
KARS-208ENST00000566772 Q9UF83 564 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 V9GYY9 64 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 ZFYVE26Q68DK2 2539 aa4.3□□□□□ -1.72
KARS-208ENST00000566772 COL4A2P08572 1712 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 LAMA1P25391 3075 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 KIF26AQ9ULI4 1882 aaPredicted RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 FAM208BQ5VWN6 2430 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 A0A1B0GUA9 196 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 A0A1W2PQ72 361 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 NCBP2LA6PVI3 153 aaKnown RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 ERI3O43414 337 aaKnown RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 CRLF1O75462 422 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 SC5DO75845 299 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 RAB4AP20338 218 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 SHC1P29353 583 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 ARL2P36404 184 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 RAB7AP51149 207 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 MAP3K7CLP57077 242 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 ZNF45Q02386 682 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 LRRC63Q05C16 580 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 ORC2Q13416 577 aaPredicted RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 UNC119Q13432 240 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 ZSCAN26Q16670 478 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 PTPN20Q4JDL3 420 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 MARC1Q5VT66 337 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 Q6ZS52 159 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 RALGPS2Q86X27 583 aaPredicted RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 TMEM61Q8N0U2 210 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 MDS2Q8NDY4 140 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 CLDN23Q96B33 292 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 CCDC124Q96CT7 223 aaKnown RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 CENPNQ96H22 339 aaPredicted RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 ZNF317Q96PQ6 595 aaPredicted RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 SMIM14Q96QK8 99 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 DEFB127Q9H1M4 99 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 STX18Q9P2W9 335 aaKnown RBP4.29□□□□□ -1.72
KARS-208ENST00000566772 CLEC2DQ9UHP7 191 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 VSIG4Q9Y279 399 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 NOTCH4Q99466 2003 aa4.29□□□□□ -1.72
KARS-208ENST00000566772 SETXQ7Z333 2677 aaKnown RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 TRIP11Q15643 1979 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 C6orf47O95873 294 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 CSF3P09919 207 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 GABRG2P18507 467 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 GGT1P19440 569 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 BGNP21810 368 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 AK4P27144 223 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 CCR2P41597 374 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 MEOX2P50222 304 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 P2RY4P51582 365 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 ARFRP1Q13795 201 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 PON2Q15165 354 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 SLC1A5Q15758 541 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 TNXAQ16473 311 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 NRF1Q16656 503 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 ATP6V1FQ16864 119 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 NDUFAF6Q330K2 333 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 N4BP2L1Q5TBK1 243 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 ZNF470Q6ECI4 717 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 PAMR1Q6UXH9 720 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 NPSR1Q6W5P4 371 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 MBOAT2Q6ZWT7 520 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms