RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ZNF879B4DU55 563 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 C11orf98E9PRG8 122 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 INMT-MINDY4F8WBC2 141 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 IMPA2O14732 288 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ARPC3O15145 178 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 DHHO43323 396 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ZNF780AO75290 641 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 IGHG1P01857 330 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 SERPINA5P05154 406 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 OR2T7P0C7T2 308 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 FAM157CP0CG43 387 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ZNF16P17020 682 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 CELP19835 753 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 FUT4P22083 530 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 USF1P22415 310 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 SLC2A5P22732 501 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 AHCYP23526 432 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 INPP1P49441 399 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 DAP3P51398 398 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 MECP2P51608 486 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 AP3S2P59780 193 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 RPS23P62266 143 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 MRPS34P82930 218 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 IL18Q14116 193 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ZMAT1Q5H9K5 638 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ELFN2Q5R3F8 820 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 DMKNQ6E0U4 476 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 SFXN4Q6P4A7 337 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 RPL22L1Q6P5R6 122 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 SKA3Q8IX90 412 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 NRMQ8IXM6 262 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 SLC22A24Q8N4F4 322 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 IQCF1Q8N6M8 205 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 OR6N1Q8NGY5 312 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 OR2T27Q8NH04 317 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 OR4Q3Q8NH05 313 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ZNF519Q8TB69 540 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 FANK1Q8TC84 345 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 TMEM239Q8WW34 195 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 NEU4Q8WWR8 484 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 NSMAFQ92636 917 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 RFT1Q96AA3 541 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 FAM46AQ96IP4 442 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 NEDD4LQ96PU5 975 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 GPX7Q96SL4 187 aaPredicted RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 MDFIQ99750 246 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 PIMREGQ9BSJ6 248 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ALG8Q9BVK2 526 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 MRPL37Q9BZE1 423 aaKnown RBP5.9□□□□□ -1.46
SPG11-224ENST00000561268 BPESC1Q9GZL8 116 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 OR52D1Q9H346 318 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 C1orf198Q9H425 327 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 IL20RAQ9UHF4 553 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 CDC42EP3Q9UKI2 254 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 ING4Q9UNL4 249 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 MED31Q9Y3C7 131 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 NPTNQ9Y639 398 aa5.9□□□□□ -1.46
SPG11-224ENST00000561268 FBN1P35555 2871 aaKnown RBP5.9□□□□□ -1.47
SPG11-224ENST00000561268 IGKV1D-43A0A0B4J1Z2 117 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 A0A0B4J293 547 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 DAPL1A0PJW8 107 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ZNF726A6NNF4 738 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 C12orf71A8MTZ7 269 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 PRR23D1E9PI22 279 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 M0R233 179 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 PDCD5O14737 125 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SYNGR3O43761 229 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 PIP5K1CO60331 668 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 LILRA1O75019 489 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 RP2O75695 350 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 NCR1O76036 304 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 UCHL1P09936 223 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SBK2P0C263 348 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 PRR23D2P0DMB1 279 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 OR8G3PP0DMU2 310 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 NR2C1P13056 603 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ZNF250P15622 560 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 STOMP27105 288 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SLC6A6P31641 620 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ATP6V1E1P36543 226 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 GBX2P52951 348 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 RAB1AP62820 205 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 MRPS11P82912 194 aaKnown RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 SSBP1Q04837 148 aaKnown RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 CDONQ4KMG0 1287 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 CEP78Q5JTW2 689 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 OR2G6Q5TZ20 316 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 CARD17Q5XLA6 110 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 FAM205BPQ63HN1 556 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SLC25A47Q6Q0C1 308 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 UNQ9370/PRO34162Q6UXP9 181 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 VASH1Q7L8A9 365 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 FAM122BQ7Z309 247 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 YIPF7Q8N8F6 280 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 OR56B4Q8NH76 319 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SPATA3Q8NHX4 192 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SPRYD4Q8WW59 207 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 RAB40AQ8WXH6 277 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 MCHR2Q969V1 340 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms