RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CSNK2A3Q8NEV1 391 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 GTF3AQ92664 365 aaKnown RBP14.62□□□□□ -0.07
TPM1-228ENST00000560975 RSC1A1Q92681 617 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 NXF5Q9H1B4 397 aaKnown RBP14.62□□□□□ -0.07
TPM1-228ENST00000560975 SH3BGRL3Q9H299 93 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 TXNIPQ9H3M7 391 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 HDGFL3Q9Y3E1 203 aa14.62□□□□□ -0.07
TPM1-228ENST00000560975 RAMP1O60894 148 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 ADH1BP00325 375 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 IFI6P09912 130 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 RPS2P15880 293 aaKnown RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 HIST1H1DP16402 221 aaKnown RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 PTGER4P35408 488 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 RBMXP38159 391 aaKnown RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 OR3A4PP47883 348 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 FAM3AP98173 230 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 GFI1BQ5VTD9 330 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 OPN5Q6U736 354 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 SPNS3Q6ZMD2 512 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 TGIF2Q9GZN2 237 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 GFOD1Q9NXC2 390 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 TMEM14DPA8MWL7 114 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 LINC00271P0C7V0 271 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 DHPSP49366 369 aaPredicted RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 C1orf140Q5VVS0 124 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 ZNF574Q6ZN55 896 aaPredicted RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 HSD17B11Q8NBQ5 300 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 TGM7Q96PF1 710 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 RARRES2Q99969 163 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 SLC35B3Q9H1N7 401 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 PRDM13Q9H4Q3 707 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 C19orf12Q9NSK7 152 aa14.61□□□□□ -0.07
TPM1-228ENST00000560975 VSX1Q9NZR4 365 aaPredicted RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 MRPS28Q9Y2Q9 187 aaKnown RBP14.61□□□□□ -0.07
TPM1-228ENST00000560975 A0A0J9YY10 115 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 CRTAPO75718 401 aaPredicted RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 TTRP02766 147 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 NDUFB7P17568 137 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 SERPINA2P20848 420 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 PPP1CCP36873 323 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 PEG10Q86TG7 708 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 MFSD8Q8NHS3 518 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 FNDC9Q8TBE3 224 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 SCGB3A2Q96PL1 93 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 GAL3ST4Q96RP7 486 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 SOX7Q9BT81 388 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 ADAM19Q9H013 955 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 LUZP4Q9P127 313 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 IGKV1D-43A0A0B4J1Z2 117 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 GAPDHP04406 335 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 IL11P20809 199 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 GJA4P35212 333 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 ZNF84P51523 738 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 GPM6BQ13491 265 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 SGCBQ16585 318 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 FIP1L1Q6UN15 594 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 HIST2H3AQ71DI3 136 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 AVL9Q8NBF6 648 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 CCDC54Q8NEL0 328 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 MRPL24Q96A35 216 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 SCARF2Q96GP6 870 aaPredicted RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 ZDHHC12Q96GR4 267 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 WFDC1Q9HC57 220 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 RCL1Q9Y2P8 373 aaKnown RBP14.6□□□□□ -0.07
TPM1-228ENST00000560975 GON4LQ3T8J9 2241 aa14.6□□□□□ -0.07
TPM1-228ENST00000560975 MASP2O00187 686 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 XRCC2O43543 280 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 DEDDO75618 318 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 DANCRP0C864 163 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SNU13P55769 128 aaKnown RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 PCK2Q16822 640 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SOHLH1Q5JUK2 328 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SPRED2Q7Z698 418 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 OR5D14Q8NGL3 314 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 B3GALT5Q9Y2C3 310 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 CLDN16Q9Y5I7 305 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 RANBP2P49792 3224 aaKnown RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 NSA2O95478 260 aaKnown RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 SLC2A1P11166 492 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 GABRA4P48169 554 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 FUT7Q11130 342 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 GAMTQ14353 236 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 WDFY1Q8IWB7 410 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 KDF1Q8NAX2 398 aaPredicted RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 UBAC2Q8NBM4 344 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SLC26A10Q8NG04 563 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 OR51E1Q8TCB6 317 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 TMEM59Q9BXS4 323 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 GPR61Q9BZJ8 451 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 PNO1Q9NRX1 252 aaKnown RBP14.59□□□□□ -0.07
TPM1-228ENST00000560975 OSGIN2Q9Y236 505 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 RTTNQ86VV8 2226 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 C17orf105B2RV13 164 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 CLDN4O14493 209 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SCGNO76038 276 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 CHRM2P08172 466 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 ZNF20P17024 532 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 CHATP28329 748 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 ASCL1P50553 236 aa14.59□□□□□ -0.07
TPM1-228ENST00000560975 SLC35A1P78382 337 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms